Ralstonia pseudosolanacearum GMI1000: RSc1628
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Entry
RSc1628 CDS
T00071
Symbol
rluD
Name
(GenBank) probable ribosomal large subunit pseudouridine synthase d protein
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rso03009
]
RSc1628 (rluD)
Enzymes [BR:
rso01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
RSc1628 (rluD)
Ribosome biogenesis [BR:
rso03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RSc1628 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
CAD15330
UniProt:
Q8XYX8
LinkDB
All DBs
Position
1748919..1749995
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AA seq
358 aa
AA seq
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MSDDAVADLPAASQDADDTLDDEALDLSAPGAGQAIEPIIVEIPEALHGERLDKALAKLL
PDYSRSRLQQWIDAGAVRVGGAAVRPRAAVCGGDRIEVVPQRADDENAFVAEPVDLDVVY
EDDTLLVINKPAGLVVHPAAGNWSGTVLNGLLHRYPQAAGLPRAGIVHRLDKETSGLMVV
ARTLPAQTDLVRQLQARTVKRTYLALVWGETPEAGTIDAPIGRDPRDRTRMAIIETASGK
PARTHFKTLDVVDLGRAQVSLVQCQLETGRTHQIRVHFESEGHPLLGDPVYTRNFRRGRP
QTIKAPLPAPFARQALHAVRLGLVHPASGQSVHWHAGVPDDLAELMDALEMDPDVDLV
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgacgacgcagtggccgacctcccagccgcctcgcaagacgccgacgatacgctc
gacgacgaggcgctcgacctgtccgcgcccggcgcggggcaggccatcgaacccatcatc
gtggagattcccgaggcgctgcacggcgagcggctcgacaaggcgctcgccaagctgctg
cccgattactcccgcagccgcctgcagcaatggatcgacgccggcgccgtgcgcgtgggc
ggggctgcggtgcggccgcgcgcggcggtttgcggcggcgaccgcatcgaggtcgtcccg
cagcgcgccgacgacgagaacgccttcgtcgccgagcccgtcgacctggatgtcgtctat
gaagacgacacgctgctggtgatcaacaagcccgccggcctggtggtccaccccgctgcc
ggcaactggagcggcaccgtgctcaacgggctgctgcaccgctatccgcaggcggccggc
ctgccgcgcgcggggatcgtccaccggctcgacaaggagacctccgggttgatggtggtc
gcccgcacgctgcccgcgcagacggatctcgtacgccagttgcaggcccgcaccgtcaag
cggacctacctggcgctggtctggggcgagacgcccgaggctggcaccatcgatgccccg
atcgggcgcgacccgcgcgaccgcacccgcatggccatcatcgagaccgccagcggcaag
ccggcgcgcacgcatttcaagacgctggacgtggtcgacctcgggcgcgcgcaggtgtcg
ctggtgcagtgccagctggaaacggggcgcacgcaccagattcgcgtgcacttcgagtcc
gagggccacccgctgctgggcgacccggtctatacgcgcaacttccgccggggccggccg
cagacgatcaaggcgccgctgccggcaccgtttgcgcggcaggcgctgcatgcggtgcgc
ctggggctggtgcatcccgcgtcgggccagtcggtgcactggcatgccggtgtgcccgac
gacctggccgaactgatggacgcactggagatggaccccgatgtcgatctcgtctga
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