Ralstonia pseudosolanacearum GMI1000: RSc1775
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Entry
RSc1775 CDS
T00071
Name
(GenBank) probable hemagglutinin-related protein
KO
K15125
filamentous hemagglutinin
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
rso00536
]
RSc1775
Glycosaminoglycan binding proteins [BR:
rso00536
]
Heparan sulfate / Heparin
Microbial pathogens
RSc1775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fil_haemagg_2
TPS
ESPR
Fil_haemagg
Motif
Other DBs
NCBI-ProteinID:
CAD15477
UniProt:
Q8XYI3
LinkDB
All DBs
Position
1901562..1911059
Genome browser
AA seq
3165 aa
AA seq
DB search
MNAKCYRTVFNAARGMLVAVEESARSTGKGRGAGSGASRRRASALTLTAAAALAAPGLNA
QSLTPDRSVPGPHPVVGVAANGTPVVNINAPSAAGVSSNAFTHYNVGQAGVVLNNSGQNS
QTQIAGWVQGNPFLGNNSARVILNQVTSGNPSTLAGPTEIAGNRANLIVANPAGIICSGC
SFIQAPRVTLTTGTPNFDALGNLSSLSVQQGQITVNGAGLDARGAQLDLLSRAMAINGAV
WAERLNAVAGANSVDYGSVTPTAIAGTGPAPQVAIDVGQLGSMYGGGATRLIGTEQGLGV
NIGGNLAALTGRLDLSANGDVTITPTGRVQSAADLAIAAPNVTNQGVISTPGNVSISGST
ANTGSVVAGGNVAIAGPQITNTGTIGAGVDANGGVTQAGSVALNAAGTVRNGGSLLAGQD
IGVSAGSIDTGNGSVNARGAVTLTAAGDVSSRGAAVSANSVAIQAGGTLDNAAGSLWSTT
GMQVGAQRVVNQGGLLGAVGDVAVTAGSVDNSAGTIGSQTGGLNVNSAGAIANAGGKLVA
AQEASLTGTSLGNQGGTVSVRNLSINTGTGGIDNTGGTVSAAGTAAIGAGALVNRGGTLA
AVGDVALKVGRLDNTSGALGSQTAGLKLDSTGDVVNAGGKLVAAQDASIAAASLNSQGGT
ISARNLSLNTGTGSVDNTNGTVSARAAATIAAGNLVNRGGTLVAVGDVTAHVGSLDNTGG
AFGSQSGGLNVTSAGAIDNAGGKLVAAQDATLNAASLGNQGGTISARNLSLNTGTGAIDN
TKGTVSAAGTATVDAGSLINQGGTLVAVADVQANVGRLDNTGGGLGSQSGGLNVTSAGAI
DNAGGKLVAAQDASLTGTSLGNQAGTVAGRNVTVNTGTGALDNTGGAIAAAAGLDATAGA
LTNANGVMQAGTTLAVRGQSLTNTNGALIGNAVSVNSGTLANRQGTISSATTLDVQGQSL
NNAQGKLVSNGTLTIHDDTVTNAGGQIASNADVTVSGTTLDNSAGLMHAGGTLSVNGASV
LNKNTNTAGTGMEGANVALTATTSFDNTAGAVRSDQSTQITAPAIDNTQGAIQSAGTVGA
KAAGVLTNTRGNLTGTRSVAVAAGHMSGDGTVQSQGSVSLNLQSDYVNTGTVAAGQDVSV
TTTGNVTNSGTISAGRNLAVSANNIANTQSGQLIGAVSNTLTARGTLSNDGLIDGGATVV
RANTVVNTGRLYGDTVAIQANTLTNTVNASGVAGVIASRGDMDLGVQALNNQEHALIYTA
GNLRVGGALDAGNHATGSAQSVTNGSATINADANLTIAAAQINNRNNHFSAINQTSAGSH
VTFYRLDGSLQNIDPSTVWLFHQNTGEWHTGADWPWLGDDDYKVMVMPSAQYPFERYGPP
FDYSKEASKVAMIGAPLSFPIGAAYSPGGVCSGDNCTVSEYPEHFVYSASDRIWDVFGIA
RPQEIGPEPIREDYFGARRWQYDADHAAWQQRHDAALPQYQQLNNAIAAFNRDFSHRQVD
HFTIYDGTQQVTRTIVTQSDPGTITSGGSMTLNAGVVNNVASQIVAGGDLTGSNVIGTRP
NNVGMQGTQTVTTTGQAIYTHVDDRDRVNDAQPWQGQTEQTQFQLDVSATSGTGPNSQHT
VKSVAVAATAGQGNGGATAVADHMTIAGGTVQPGAASVAVPTGGTVRAVTSTVAAPAGST
VSAGTAAVTVPNSGAVIRTVVPNLTLPNNALYRVVRDPGSRVLVETDPRFTNFRQWSSSD
VMLSQFRNDPGATLKRIGDGFYEQQLIQQQIIRATGQRFIGDYTSNEDEYKALLAAGVAA
GKAFGLNVGTALTDEQMARLTTDIVWMVRQTVTLADGSRQEVLVPQVYLRAKDTDITGGG
TLMAGNNVSFQAKGDVTNSGTIASRRVTVVTGDNIVNTGTLAGKTLLAQAAQDINNLGGH
IQGDQVLLAAGRDINLTSTTASTKNATTTGTNISQVASIAAGTLSIQAGRDANLTAAAID
TSGDAAITAKRDVNLNALRQSSEEHVNWGNQNRSDRSSYADAGTQIQTGGKLAIGAGQDV
NATAAYANATGSIQMAAGRDVNLNAGQSHQDVRDEHFQTEKGFLSTKTTHTIDAAGQTNA
VGTTLSGDTVTIAAGRDMTAKAATIAGTGDVNLSAGRDLTVTTADTGTSESHFKDVKASG
LGSAGAGISYGTHQTTDSNNDTVRGSQGSLIGSTDGSVNMRAGRNLHITGSDVVAAQNVT
GIGQNVTIDASTTDRHHDETHETKSSGFTLAVKSPVLGAFQNVMQQADAAGNSQNGRAAA
LHAIAAVDGMGGVFSSMGGAAGNMGKGQKPEAKIELSWGSTSSKNTFTENSTQHNGSNIK
AGGMAAFVATGDGTPGSGNVTIQGSDVNAQNVLLQAKNQVNLVNSTDTDSTRSTNESKSA
SVGVSYGTGGWGVSASMPKAHGDANSDAATQNNTHVNARGTATIVSGGDTNIAGANVKAD
KVVADVGGNLNLASVQDTSHSTAHQESAGGGFSVSQGGASANLSFSNGRASGSYAGVNEQ
TGIQAGAGGFGINVKGNTDLKGAYIASTATPDKNQLTTGTLTWSDVQNHSDYSATSVGFS
ANGSVGNGGSTYNKNSGKPTGGAMPMLMQHESSSESATTRSAIAQGAITITDQAHQKQDV
GSLNRDTENLNGKVGKTPDLQNVLNNQADMMAAAQAAGAAVARAIGDIANAKQDEARAAA
KQAHEDGNEELAKQYAAEADRWKEGGAYRAGLHVAGGALVAGLGGGSAIGGAVGAGAASL
AAPKLAELADKVSSSVGGGAAGQMVGNVVANVAAGAVGSVGGGSGAFMGSNVDRFNRQLH
QDKDPRKDERKRIQQDIASAYAATHPGMTVEQATQILADQLFRQVDTTAAAKGGWNQEAA
NYLNNYAAAHAGETVGKDQWGNAVPLFGTAAGYQRNDSTIFSANPQTTTPPPTLGLGSLG
SYFKGVGQGLGDTLGHPLDTIWNSVKGVYGTITDPTGTAQQMHDEARNVVVQAGNGDFAP
AGQQVGQQIGTTLVDSAAGAGGGAAAGKVVSAIKGSGAAAAADAAADAQVSNNFYRDGVS
YDVRRIAYEAEAMRISDGVDRMRAAGMSEEDVARWAVDQRNNLKTTYRSISPPDFVEAVE
ARNLEKYGNKLGPSADQLRQKGLSWTEIANSAARTGGQDLGFGKL
NT seq
9498 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgaagtgctatcgaaccgtcttcaacgctgcacggggcatgctggtggccgtg
gaggagtcggccaggagcacgggcaaggggcgcggcgcgggcagcggggcgagccgtcgg
cgcgcgtccgcgctgacattgaccgccgcagcggcgctggcagcgccgggcttgaacgcg
caatcgctgacgccggaccgtagtgttcccgggccgcatccggtggtgggtgtggcggca
aacggcaccccggttgtcaacatcaacgcaccctcggccgctggcgtcagctcgaatgcg
ttcacgcactacaacgtcggccaggccggcgtcgtgctcaacaacagtggccagaattcg
cagacccagatcgccggctgggtccagggcaatccgttcctgggcaacaacagcgcgcgc
gtgatcctgaaccaggtcaccagcggcaatccgtccacgctggcggggccgaccgagatc
gccggcaaccgggcgaacctcatcgtggccaatcccgcggggatcatctgttcggggtgt
tcattcatccaggcccctcgggtgacgctgaccaccggcacgccgaacttcgacgcgctg
ggcaacctctccagcctgtccgtccagcagggccagatcaccgtcaacggcgcggggctc
gatgcgcgcggcgcgcagctcgacctgctgtcgcgcgcgatggcgatcaatggcgcggtg
tgggccgagcggctcaacgcggtggccggcgccaacagtgtcgactatggcagcgtcacg
cccacggccatcgcgggcacggggccggcgccgcaggttgctatcgatgtggggcaactt
ggcagcatgtatggcggtggcgcgacccggctgatcggcaccgagcaagggcttggcgtc
aacatcggcggcaacctggctgcgctgaccgggcgcctggatctgtcggccaatggcgat
gtcaccatcacgcccaccggccgcgtgcagagtgccgccgatctggcgattgccgcgccg
aacgtcaccaaccagggcgtgatcagcacgccgggcaatgtgtccatctccggtagcacg
gccaatacgggcagcgtggttgccggcggcaacgtggcgatcgctgggccgcagatcacg
aacaccggcaccatcggcgcgggcgtcgatgcaaacggtggcgtgacccaggccggcagc
gtcgcgctcaatgcagcgggcaccgtgcgcaatggcggcagcctgctggcgggccaggat
atcggcgtgagcgccggcagcatcgataccggcaacggcagcgtcaacgcgcgtggcgcg
gtcacgctgacggcggcgggcgatgtgtcgagccggggcgcggccgtttcggccaacagc
gtggcaatccaggccggcggcacgctcgacaacgcggccggcagcctgtggtcgaccacg
ggcatgcaggtgggtgcgcagcgcgtggtcaaccagggcgggttgctgggggcggtcggc
gatgtggcggtcacggccggctcggtggacaacagcgcaggcaccatcggctcccagacg
ggcggcctgaacgtgaacagcgcgggcgccatcgccaatgccggcggcaagctggtcgcc
gcgcaggaggcgtcgctcaccggcacgagtctgggcaaccagggcggcacggtgtcggtg
cgcaatctgtcaatcaacacggggaccggcgggatcgataacaccgggggaacggtgtcc
gccgccggcacggctgccatcggcgctggggcgctggtcaaccggggcggcacgctggct
gccgtgggtgacgtggcgctcaaggtcggccgcctggacaacacctcaggcgcgctcggc
tcgcagacggccggcctgaagctggacagcactggcgatgtcgtcaatgcgggcggcaag
ctggtcgccgcacaggatgcctcgatcgcggccgccagcctgaacagccagggcggcacg
atctcggcgcgcaacctgtcgctgaacaccggaaccggctctgtcgacaataccaacggc
acggtgtccgcccgagcggctgccacgattgccgccggcaacctcgtcaaccggggcggc
accctggtcgcggtgggcgacgtcaccgcacacgtcggcagcctggacaacaccggcggc
gcgttcggctcgcagtcgggcggcctgaacgtgactagtgccggcgccatcgacaacgcg
ggcggcaagctggtggccgcgcaggatgccaccctcaacgcagcgagcctgggcaaccag
ggcggcacgatctcggcgcgcaacctgtcgctgaacaccggaaccggcgccatcgacaat
accaagggcacggtatccgcggctggcacggcgacggtcgatgcgggcagcctgatcaac
caagggggcacgctggttgcggtggcggatgtgcaagccaacgtcggccggctggacaac
actggcggcgggctcggctcgcagtcgggcggcctgaacgtgaccagtgccggcgccatc
gacaatgcgggcggcaagctggtcgccgcgcaggatgcgtcgctcaccggcacgagcctg
ggcaaccaggccggcaccgtggccgggcgcaacgtcacggtcaacaccggcactggcgcg
ctggacaacaccggtggcgccatcgcggctgcggcggggctcgatgcgaccgccggcgct
ctcacgaacgccaacggcgtgatgcaggccggcaccacactcgccgtacgcgggcaatcc
ctgacgaacacgaacggtgcgctgatcggcaacgccgtgtcggtcaacagcggcacgctc
gccaaccggcagggcacgatttcgtcggccaccacgctggatgtacaaggccagtcgctg
aacaacgcgcagggcaagctcgtctccaatggcaccctgacgatccacgacgacaccgtc
accaatgccggcggccagatcgcctccaacgccgatgtcacggtcagcggcacgaccctc
gacaacagcgccggcctgatgcacgcgggcggcacgctgtcggtcaacggcgcgagtgtc
ctcaacaagaacaccaacacggccggcaccggcatggaaggcgccaacgtggcgctgacc
gccaccacgtccttcgacaacaccgccggcgcggtccgctcggaccagagcacgcagatc
accgcgccagccatcgacaacacgcagggcgcgatccagtcggcaggcacggtcggcgcc
aaggcggcaggggtgctgaccaacacccggggcaacctcaccggcacccgcagcgtggcg
gtcgcggccggccacatgagcggcgacggcacggtgcaatcccagggcagcgtgtcgctg
aacctgcaatcggattacgtcaacaccggcacggtcgccgccggccaggacgtctcggtc
accacgactggcaacgtgaccaactcgggcacgatttccgccgggcgcaacctggcggtc
tcggccaacaacatcgcgaacacgcagagcgggcagctgatcggcgccgtgtccaacacc
ctgaccgcgcggggcacgctgtccaacgatggcctcatcgatggcggtgccaccgtggtg
cgcgcgaacacggtggtcaacaccggtcgcctgtatggcgataccgtggcgatccaggcg
aatacgcttaccaacaccgtgaacgctagcggcgtggccggggttatcgccagccgcggt
gatatggacctgggcgtgcaggcgctcaacaaccaggagcacgcgctcatctacacggcg
ggcaatctgcgcgtcggcggggcactggatgccggcaaccatgccaccggctccgcgcaa
agcgtgaccaacggttcggccaccatcaatgccgatgccaatctcaccatcgccgccgcg
cagatcaacaaccggaacaatcacttctctgcgatcaaccagacgtcggccggcagccac
gtcacgttctaccggctcgacggctcgctgcagaacattgatccgtccacggtctggctc
tttcaccagaacaccggcgagtggcacaccggcgccgactggccatggctcggcgacgac
gattacaaggtcatggtgatgccctcggcgcaatacccgttcgagcgttacgggccgccg
ttcgattacagcaaggaggcatcgaaggtggccatgatcggcgcaccgctcagtttcccg
atcggcgccgcctacagcccgggtggtgtctgctccggcgacaactgcacggtgagcgag
tatccggagcacttcgtctactccgcgagcgaccgcatctgggatgtgttcggtatcgcg
cggccgcaggagatcgggccggagcccatccgggaggactattttggtgcccggagatgg
cagtacgacgccgatcatgctgcctggcagcagcggcatgatgccgcccttccgcaatac
cagcagctgaacaacgccatcgccgcgttcaaccgggacttcagccaccggcaggtcgac
cacttcacgatctacgacggcacccagcaggtcacccgcaccatcgtgacccagagcgac
cccggcaccatcacctccggcggcagcatgacgctcaacgccggcgtggtgaacaacgtc
gccagccagatcgtggcggggggcgacctgaccggcagcaacgtcatcggcacgcggccg
aacaacgtcggcatgcagggcacgcagaccgtcaccaccacggggcaggcgatctacacg
cacgtcgatgaccgcgatcgcgtcaacgatgcgcagccgtggcagggccagaccgagcag
acccaattccagctggacgtcagcgccaccagtggcaccgggccgaacagccagcacacc
gtcaaatccgtcgcggtggccgccacggccggtcaaggcaacggcggcgccacggcagtc
gcggatcacatgaccattgctggcggcacggttcagcccggcgcggcctccgtcgccgtg
ccgaccggcggcaccgtccgcgccgtgacatccaccgtggccgcgccggccggcagtacg
gtcagcgccggtaccgccgccgtgaccgttccgaacagcggggccgtcatccgcaccgtg
gtgcccaacctgacgctgcccaacaatgccctgtaccgcgtcgtccgcgacccgggcagc
cgcgtgctggtcgagaccgacccgcgcttcaccaacttccgccagtggtcgtccagcgac
gtgatgctgtcgcagttccgcaatgacccgggcgccacgctcaagcgcatcggcgacggc
ttctacgagcagcagttgatccagcagcagatcatccgcgccaccgggcagcgcttcatc
ggcgattacaccagcaacgaagacgagtacaaggcactgctggccgccggtgtcgccgcc
ggcaaggccttcgggctgaacgtcggcaccgcgctgaccgacgagcagatggcgcggctg
accaccgacatcgtgtggatggtcaggcagaccgtgacactggccgacggcagccggcaa
gaggtgctggtgccgcaggtctacctgcgcgccaaggacaccgacatcaccggcggcggc
acgctgatggcgggcaacaacgtgtcgttccaggccaagggcgatgtcaccaacagcggc
accatcgccagccgcagggtgaccgtcgtcaccggcgacaacatcgtcaataccggcacg
ctggcgggcaagacgttgctggcgcaggccgcgcaggacatcaacaacctcggcgggcac
atccagggcgaccaggtgctgctcgccgccgggcgcgacatcaacctgaccagtaccacc
gccagcaccaagaacgccaccaccaccggcaccaacatcagccaagtggcgagcatcgcg
gccggcacgctgtcgatccaggccgggcgggacgccaacctgacggcggcggccatcgac
acgtcgggcgacgctgccatcacggcgaagcgtgacgtcaacctgaacgcgctgcggcaa
tcgagcgaggagcacgtcaactggggcaaccagaaccgctcggaccgctcgtcgtacgct
gacgccggcacgcagatccagacgggcggcaagctggcgatcggtgcggggcaggacgtg
aacgccacggcggcgtacgccaacgcgaccggcagcatccagatggcggcgggtcgtgac
gtcaacctcaacgctggtcagagccaccaggatgtgcgggacgagcacttccagaccgag
aagggtttcctctcgaccaagacgacgcataccatcgacgcggcaggccagaccaacgca
gtgggcaccacgctgtctggcgacacggtgaccattgcggccgggcgcgacatgaccgcg
aaggcggcgaccatcgccggtacgggcgacgtgaacctatcggccggccgcgacctgacc
gtgacgacggcggataccggcacgagcgaatcgcacttcaaggacgtcaaggcgtcgggg
cttggtagcgcgggcgccggtatctcctatggcacgcatcagaccaccgactcgaacaac
gacacggtccggggttcgcagggcagcctcattggcagcacggatggcagcgtcaatatg
cgggccggtcgtaacctgcacatcacgggctcggacgtggtggccgcccagaacgtgacg
ggcatcggccagaacgtgaccatcgatgcctcgaccaccgaccgtcaccacgacgagacg
cacgaaaccaagagctcgggcttcacgctggcggtgaagtcgcccgtgctcggtgcgttc
cagaacgtcatgcagcaggctgacgcagcgggcaacagccagaacggccgggccgcggcg
ctgcacgcgatcgcggcggtggatggcatgggcggcgtgttcagctcgatgggcggcgcg
gcgggcaacatgggcaagggtcagaagccggaagccaagattgagttgagctggggctcg
acctccagcaagaacaccttcaccgagaacagcacccagcacaacggcagcaacatcaag
gcgggcggcatggcagcgttcgtggccaccggcgatggcacgcccggcagcggcaacgtg
accatccagggctcggacgtgaacgcacagaatgtgctgctgcaggccaagaaccaggtc
aacctggtcaacagcacggacacggattccacccgcagcaccaacgaatcgaagagcgcc
agcgtgggcgtgtcatatggcacgggaggctggggcgtgtcggcgtcgatgccgaaggcc
cacggagacgccaactcggatgccgccacgcagaacaacacgcacgtcaacgcccgcggc
accgcgaccatcgtgagcggcggcgacaccaacatcgcgggcgcgaacgtgaaggccgac
aaggtggtggccgacgtcggcggcaacctgaacttggccagcgtgcaggacaccagccac
agcaccgcgcatcaggagagcgcaggcggcggcttcagcgtcagccagggcggcgcgagc
gccaacctcagcttcagcaacggcagggccagcggcagctacgcgggtgtgaacgagcag
acgggcatccaggcgggcgcgggcggtttcggcatcaacgtcaagggcaacacggacctc
aagggcgcgtacatcgccagcacggccacgccggacaagaaccagctcaccaccggcacc
ctgacctggagcgatgtccagaatcactcggactacagcgcgaccagcgtcgggttcagc
gcgaacggctcggtgggcaacggcggcagcacctacaacaagaactccggcaagcccacc
ggaggcgccatgccgatgctgatgcagcacgaaagcagcagcgagagcgccaccacgcgc
agcgcgatcgcgcagggcgccatcacgatcaccgaccaggcccaccagaagcaggacgtg
ggcagcctgaatcgggatacggagaacctgaacggcaaggtcggcaagacgccggacctg
cagaacgtgctgaacaaccaggccgacatgatggcggcagcccaggcagcgggtgcggcg
gtggcccgcgcgatcggcgacatcgcgaatgccaagcaagacgaagcgcgagccgcagcc
aagcaggcccacgaagacggcaacgaggagttggccaagcaatacgctgcggaagccgac
cggtggaaggaaggcggggcataccgcgccggcctgcacgtggcgggcggcgcgctggtg
gccggcttgggcggtggtagcgcaatcggcggcgccgtcggcgctggggccgcatcgctc
gcggcacccaaactggccgaactggccgacaaggtgtcgtcctccgtgggcggcggggcg
gccgggcagatggtgggcaacgttgtggcgaacgtggctgcgggggcggtcgggtcggtt
ggtgggggctcgggggcgttcatgggtagcaatgtggaccgctttaatcggcagttgcat
caggacaaagatcctcgcaaggatgagcgaaagcgcattcaacaagacatcgcgtcggcc
tatgcagctacccatcccggcatgacagttgagcaggcaacccagattttggctgaccag
ctttttcgacaagtggatacaacggcggcagccaagggcggttggaatcaggaggccgca
aactacctgaacaactatgcggcagctcatgctggtgagactgttggcaaggaccaatgg
ggcaatgcggtgcctttgtttgggacagctgcgggctatcaacgcaatgacagtacgatt
ttcagcgcaaatccgcagacaacgactcctccgcctacgttggggctcggttcgcttggg
agctatttcaagggcgtgggccagggtcttggcgatacgctgggacaccccttggatacc
atctggaacagcgtaaaaggggtctatggcaccatcactgatccaacaggtacagcgcag
cagatgcacgatgaggcgcgtaacgtggttgttcaagctggcaacggggactttgcgccg
gctgggcaacaagtggggcagcaaattggcacgacgcttgtcgattcggcagctggagct
gggggtggtgcggcggccggaaaggtagtctctgccattaagggaagcggagccgccgcc
gctgccgacgccgcagctgatgctcaggttagtaacaacttttatcgtgatggcgtctcc
tacgatgtaagacgcattgcttacgaggcggaggcaatgcgaatttctgacggtgtagac
cggatgcgggccgctggtatgagcgaggaggatgttgcgagatgggcggtagaccagaga
aataatctaaaaacgacgtatcgcagtatctcgccgcctgatttcgttgaggccgtagag
gctagaaatcttgaaaaatatgggaataaactaggtccgtcagccgatcagcttaggcag
aaggggctgtcatggactgaaattgcaaactccgccgcacgcaccggcggacaagacttg
gggtttggaaagctatga
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integrated database retrieval system
