KEGG   Ralstonia pseudosolanacearum GMI1000: RSc1872
Entry
RSc1872           CDS       T00071                                 
Symbol
dnaQ
Name
(GenBank) probable dna polymerase III (epsilon chain) protein
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
rso  Ralstonia pseudosolanacearum GMI1000
Pathway
rso03030  DNA replication
rso03430  Mismatch repair
rso03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rso00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RSc1872 (dnaQ)
   03430 Mismatch repair
    RSc1872 (dnaQ)
   03440 Homologous recombination
    RSc1872 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rso03032]
    RSc1872 (dnaQ)
   03400 DNA repair and recombination proteins [BR:rso03400]
    RSc1872 (dnaQ)
Enzymes [BR:rso01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RSc1872 (dnaQ)
DNA replication proteins [BR:rso03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     RSc1872 (dnaQ)
DNA repair and recombination proteins [BR:rso03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     RSc1872 (dnaQ)
SSDB
Motif
Pfam: RNase_T RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: CAD15574
UniProt: Q8XY91
LinkDB
Position
complement(2056345..2057073)
AA seq 242 aa
MRQIVLDTETTGLNAATGDRVIEIGCVELVNRRLTGRNLHFYLNPEREIDAGAMAVHGIT
NEFVADKPKFAEVVDEIRDYVQGAEAIIHNAAFDLGFLDMEFKRLGLPPFREHLAGHIDT
LLDARRMFPGKRNSLDALCDRLGVSNAHRTLHGALLDAELLAEVYLAMTRGQNTLVIDML
ESGETAAAEAAVIDLSGLELPILLATEAEAAAHATVLKEIDKASGGKTVWLRDAPEAAPQ
AG
NT seq 729 nt   +upstreamnt  +downstreamnt
atgcgacagatcgtcctcgataccgaaaccaccggcctgaatgccgccaccggcgaccgc
gtgatcgaaatcggctgcgtggagctggtcaaccggcggctgaccggccgcaacctgcat
ttctacctcaaccccgagcgcgagatcgacgccggcgccatggcggtgcacggcattacc
aacgagttcgtcgccgacaagcccaagttcgccgaggtcgtcgacgagatccgggactac
gtgcagggcgccgaggcgatcatccataacgccgcgttcgacctgggcttcctcgacatg
gagttcaagcggttggggctgccgccgttccgcgagcatctggccggccacatcgacacg
ctgctcgatgcgcgccggatgttccccggcaagcgcaactcgctggacgcgctgtgcgac
cgcctcggcgtgagcaacgcccaccgtacgctgcacggcgccttgctggacgcggaactg
ctggccgaagtctatctggccatgacgcgcggccagaacacgctggtgatcgacatgttg
gagagcggcgagacggccgccgccgaggccgccgtgatcgacctgagcggcctggagctg
ccgatcctgctggcgaccgaagcggaagccgcggcgcacgcgaccgtgctcaaggagatc
gacaaggccagcggcggcaagacggtctggcttcgggatgctccggaggccgcgccgcag
gcgggctga

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