Ralstonia pseudosolanacearum GMI1000: RSc2162
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Entry
RSc2162 CDS
T00071
Name
(GenBank) probable cog1234, metal-dependent hydrolases of the beta-lactamase superfamily III protein
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rso03016
]
RSc2162
Enzymes [BR:
rso01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
RSc2162
Transfer RNA biogenesis [BR:
rso03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
RSc2162
Prokaryotic type
RSc2162
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
CAD15869
UniProt:
Q8XXF2
LinkDB
All DBs
Position
complement(2345371..2346387)
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AA seq
338 aa
AA seq
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MHGLFDARLVNDAFGDPGLYLDFHDERRALLFDLGDLSRLLPGQLLRLSHVFVTHTHMDH
FAGFDRLLRVSLGRKDRIVVLGGPGFIAQVGHKLSAYTWNMVERYTEALVIEAREIGLDG
WQRRVLFSSRHHFAPEAGARLERTDDVLHDEMTFRVRGRFVDHDMPCLAFLIEEKARIGV
NKDGLMALGMTAGAWLRELKHAVLSGAAADTPLLVQWRDRHGDHASTRLVGELCQLVLDV
VPGQRIGYVTDLRYTEQNVQTLVQLMRGVDQLYIESVFLDEDKAHGLRKNHLTARQAGLI
ARALGAGAVVPFHFSPRYQGHGSALTAEVRAAWAGLAG
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgcacggcctgttcgacgcccggcttgtcaacgatgccttcggggatccgggcctctat
ctggatttccatgacgagcggcgcgccttgctgtttgatctcggcgatctctccaggctt
ctgcccggccagctgctgcgtctgtcccatgtttttgtgacccatacgcacatggatcat
ttcgccggtttcgatcggttgctgcgcgtgtcgctcgggcgcaaggaccgtatcgtggtg
cttggtgggccgggcttcatcgcgcaagtggggcacaagctgagcgcctacacctggaac
atggtggagcgctacacggaggcattggtgatcgaggcacgcgagatcggactggacggc
tggcagcggcgcgtgcttttctcgagccgtcaccacttcgcgcccgaagccggcgcgcgt
ctcgagcgcacggatgacgtgctgcacgacgaaatgacgtttcgtgtgcggggccgcttt
gtcgatcacgacatgccttgcctcgctttcctgatcgaggagaaggcgcgcatcggcgtg
aacaaggatgggctcatggcgctggggatgaccgccggcgcctggctgcgcgagttaaag
catgctgtactcagcggcgccgccgccgacacgccgctgctggtgcaatggcgcgaccgg
catggcgatcacgccagcactcggctggtcggggagttgtgtcagctggtgcttgatgtc
gtgccgggccagcgcattggctatgtcaccgacctgcgctacaccgaacaaaacgtgcag
acccttgtgcagctcatgcgtggcgtcgatcagttgtatatcgagagcgtgttcctcgac
gaagacaaggcgcatggcctgcgcaagaaccacttgactgcccgtcaggcggggttgatc
gcacgggcgctcggggctggggctgtcgtgccgttccatttctcgccccgctaccagggg
cacggctccgcgctgacggctgaggtgcgtgcggcctgggctggcttggccggctga
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