Ralstonia pseudosolanacearum GMI1000: RSc2197
Help
Entry
RSc2197 CDS
T00071
Symbol
cafA
Name
(GenBank) probable ribonuclease g (rnase g) (cytoplasmic axial filament protein)
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rso03019
]
RSc2197 (cafA)
03009 Ribosome biogenesis [BR:
rso03009
]
RSc2197 (cafA)
Messenger RNA biogenesis [BR:
rso03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RSc2197 (cafA)
Ribosome biogenesis [BR:
rso03009
]
Prokaryotic type
rRNA processing factors
RSc2197 (cafA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
CAD15904
UniProt:
Q8XXB9
LinkDB
All DBs
Position
2378337..2379806
Genome browser
AA seq
489 aa
AA seq
DB search
MSEDILVNITPQETRVAIVQQAAVQELHIERTLTRGLVGNIYLGKVVRVLPGMQSAFIDI
GLERAAFLHVADIWHPREAKDAPAAPHVAIEKTLFEGQALTVQVIKDPIGTKGARLSTQI
SIAGRTLVYLPQDPHIGISQKIGNETDREALRQRVTRMVPADERGGFIVRTIAEEATDEE
LANDVAYLRKIWATIRHNATTLPAPSILYQDLNLAQRVLRDFVTDDTRSIQIDSRENYQK
LIEFAQEYTPAVVERLTHYTGERPIFDLYNIEAEVERALSRRVDLKSGGYLMIDQTEAMT
TIDVNTGGYVGARNFDDTIFKTNLEAAHTIARQLRLRNLGGIIIIDFIDMESGEHRDAVL
AELRRALARDRTRITVNSFSQLGLVEMTRKRTRESLAHVLCEQCPVCQGKGQVKTPRTVC
YDILREIMRESRQFNPREFRILASQSVIDLFLEEESQHLAMLGDFIGKPISLQVESAAAS
QEQYDIILM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagacatcctcgtcaatatcaccccgcaagaaacgcgcgtagccatcgtccag
caggccgccgtccaggaactccacatcgaacgcacgctgacgcgcgggctggtcggcaac
atctatctcggcaaggtcgtgcgcgtgctgccgggcatgcagtcggccttcatcgacatc
gggctggagcgcgcggccttcctgcacgtggccgacatctggcacccgcgcgaagccaag
gacgccccggccgccccgcacgtcgccatcgagaagacgctgttcgaaggccaggcgctg
acggtgcaggtcatcaaggacccgatcggcaccaagggcgcgcggctgtccacgcagatc
agcatcgccggccgcacgctggtctacctgccgcaagacccgcacatcggcatctcgcag
aagatcggcaacgagaccgaccgcgaggcgctgcgccagcgcgtgacccgcatggtgccg
gccgacgagcgcggcggcttcatcgtgcgcaccatcgccgaggaagccaccgacgaagaa
ctggccaacgacgtcgcctacctgcgcaagatctgggcgaccatccgccacaacgccact
accctgcccgcgccgtcgatcctgtaccaggacctgaacctcgcccagcgcgtgctgcgc
gatttcgtgaccgacgacacgcgcagcatccagatcgattcgcgcgagaactaccagaag
ctgatcgagttcgcgcaggaatacacgcccgccgtggtggagcgcctgacccactacacc
ggcgagcggccgatcttcgatctgtacaacatcgaggcggaggtcgagcgcgcgctgtcg
cgccgggtcgacctgaagtccggcggctacctgatgatcgaccagaccgaggcgatgacg
accatcgacgtcaacaccggcggctacgtgggcgcgcgcaacttcgacgacaccatcttc
aagaccaacctggaagcggcgcacaccatcgcgcgccagctgcggctgcgcaacctgggc
ggcatcatcatcatcgacttcatcgacatggagtccggcgagcaccgcgacgccgtgctg
gccgagctgcgccgcgcgctggcgcgcgaccgcacgcgcatcacggtcaacagcttctcg
cagctgggcctggtggagatgacccgcaagcgcacgcgcgaatcgctcgcgcacgtgctg
tgcgagcagtgtccggtgtgccagggcaagggccaggtgaagacgccgcgcacggtgtgc
tacgacatcctgcgcgagatcatgcgcgaatcccgccagttcaacccgcgcgagttccgc
atcctcgcctcgcagtcggtgatcgatctgttcctggaagaggaaagccagcatctggcg
atgctgggcgacttcatcggcaagccgatctcgctgcaggtggaatcggcggcggctagc
caggagcagtacgacatcattttgatgtga
DBGET
integrated database retrieval system
