Ralstonia pseudosolanacearum GMI1000: RSc2211
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Entry
RSc2211 CDS
T00071
Symbol
rhlE2
Name
(GenBank) probable atp-dependent rna helicase protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Pathway
rso03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RSc2211 (rhlE2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rso03019
]
RSc2211 (rhlE2)
Enzymes [BR:
rso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RSc2211 (rhlE2)
Messenger RNA biogenesis [BR:
rso03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RSc2211 (rhlE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Fe-ADH
P-loop_SecA
SNF2-rel_dom
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CAD15918
UniProt:
Q8XXA5
LinkDB
All DBs
Position
complement(2395039..2396526)
Genome browser
AA seq
495 aa
AA seq
DB search
MNTETTSAAPSSDPVTFDTFGLHPDILRALAESGYTRATPIQAAAIPVVIAGRDVMGAAQ
TGTGKTAGFSLPIIQNLLPDANTSASPARHPVRALILTPTRELADQVYDNVAKYAKHTAL
RSAVVFGGVDMNPQTEQLRRGVEVLVATPGRLLDHVQQRSVNLSQVRMLVLDEADRMLDM
GFLPDLQRIINLLPAHRQTLLFSATFSPEIKKLAASYLRHPQTIEVARSNATADNVRQVI
YTVPDGHKQAALVHLLRQRAEQGLPSQCIVFSNSKIGCSRLARALEREKINANAIHGDKT
QTERMQTLEAFKQGTVDVLVATDVAARGLDISQMPCVINFDLPFNAEDYVHRIGRTGRAG
ASGDALSLFAPGDERLLADIEKLIKRNLPRETLTDFDPTGEQARERERRERDERRNRTEI
RRARERDERNGARVLDHTVVRPPFRPSEDPFFSRPYESNVPAEAAEAAKPAPAGGHPRSA
KRPIAALLGGVPRKR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaacactgagacaacgtctgcagcaccgtccagcgatcctgtgacgttcgacacgttc
ggcctgcatcccgatatcctgcgggccctggccgagagcggctacacccgggccacgccc
atccaggccgccgcgattcccgtggtgatcgccggccgcgatgtgatgggcgcggcgcag
accggtacgggcaagaccgccggcttctcgctgccgatcatccagaacctgctgccggac
gccaacaccagcgcctcgccggcgcgccaccccgtgcgggcgctgatcctcacgcccacg
cgcgagctggccgaccaggtctacgacaacgtcgccaagtacgcgaagcacacggcgctg
cgcagcgcggtcgttttcggcggtgtcgacatgaatccgcagaccgagcagctgcgtcgc
ggcgtggaggttctcgtcgccacgccgggccgcctgctcgatcacgtgcagcagcgcagc
gtgaacctgtcgcaggtgcgcatgctggtgctggacgaagccgaccgcatgctcgacatg
ggcttcctgcccgacctgcagcgcatcatcaacctgctgccggcgcaccggcagacgctg
ctgttctcggccacgttctcgcccgagatcaagaagctggcagcgagctacctgcgccat
ccgcagaccatcgaagtggcgcgcagcaacgccaccgcagacaacgtccgccaggtcatc
tacaccgtgccggacggccacaagcaggcggcgctcgtgcacctgctgcgccagcgcgcc
gaacagggcctgccgagccagtgcatcgtgttttccaacagcaagatcggctgttcgcgc
ctggcgagggcgctcgagcgcgagaagatcaacgccaatgccatccacggcgacaagacc
cagaccgagcgcatgcagacgctcgaagcgttcaagcagggcacggtcgacgtgctggtc
gccaccgacgtggcggcgcgcggcctcgacatctcgcagatgccctgcgtgatcaacttc
gatctgccgttcaatgcggaagactatgtccatcgcatcggccgtaccggccgcgcaggc
gcttcgggcgatgcgctgtcgctgttcgccccgggcgatgaaaggctgctggccgacatc
gagaagctgatcaagcgcaatctgccgcgcgagacgctcaccgatttcgatccgaccggc
gaacaggcccgcgaacgcgaacgccgcgagcgcgacgagcgccgcaaccgcaccgagatc
cgtcgggcccgcgagcgcgatgagcgcaacggcgcccgggtgcttgaccataccgtggtg
cgcccgcccttccggccgtcggaggatccgttcttctcgcgcccgtacgagtcgaacgtg
cccgccgaggctgcggaggccgccaagccggcaccggccggcggtcacccgcgcagcgcc
aagcgcccgattgccgccctgctgggcggcgtgccgcgcaagcgctga
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