Ralstonia pseudosolanacearum GMI1000: RSc2230
Help
Entry
RSc2230 CDS
T00071
Symbol
polA
Name
(GenBank) probable dna polymeraseIprotein
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Pathway
rso03030
DNA replication
rso03410
Base excision repair
rso03420
Nucleotide excision repair
rso03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RSc2230 (polA)
03410 Base excision repair
RSc2230 (polA)
03420 Nucleotide excision repair
RSc2230 (polA)
03440 Homologous recombination
RSc2230 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rso03032
]
RSc2230 (polA)
03400 DNA repair and recombination proteins [BR:
rso03400
]
RSc2230 (polA)
Enzymes [BR:
rso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RSc2230 (polA)
DNA replication proteins [BR:
rso03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RSc2230 (polA)
DNA repair and recombination proteins [BR:
rso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RSc2230 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RSc2230 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
CAD15937
UniProt:
Q8XX86
LinkDB
All DBs
Position
complement(2418536..2421376)
Genome browser
AA seq
946 aa
AA seq
DB search
MGMSESQETLLLVDGSSYLYRAYHALPDLRNGEGFPTGAIYGIVNMLRKLRNDYPAKYSA
CVFDAKGKTFRDELYPAYKEHRAPMPDDLRQQIEPIHEAVRALGWPILMVDGVEADDVIG
TLAERAAREGIRTVVSTGDKDLAQLVNDHVTLVNTMSNETLDPAGVLAKFGVPPGKIVDY
LSLIGDTVDNVPGVPKVGPKTAVKWLGEYGSLDSVIARAGEIKGVVGENLRNTLDWLPKG
RELLTVKTDCDLATEVPTFEALVDGGEDRAKLVDFFGRYGFKTWLREASGESLPDTRSVG
AARKAATPVKQYAPEAAAQPQAGLFDVEAPPAEVKYETVTTEAQLESWMRLLDASELVCI
DTETTSIDPMLAQLVGLSLSVEPGQACYIPVAHRGPDVSGLDAAGQLSREAVLARMKPWL
EDAARKKVGQHLKYDAHVFANHGIALRGIAHDTMLQSYVLASHRNHGMDALAERVLHLKT
ITYEEVCGKGASQIGFDEVPLDRATEYAAEDADITLRLHRALYPKVAEDDKLRYVYEQIE
MPTSIVLQKMERNGVLIDAERLARQSTGLGQRLLELEQQAYALAGQPFNLNSPKQIGEIF
FTQLKLPVIKKTASGAPSTDEEVLQKLAEDYPLPKLLLDFRGLAKLKSTYTDKLPKMVNP
QTGRVHTTYGQATAVTGRLASTDPNLQNIPVRTEEGRRIREAFVAPAGSVIVSADYSQIE
LRIMAHLSEDEGLLRAFREGQDVHRATAAEVFGVTPLEVTAEQRRYAKVINFGLIYGMSA
FGLASNLGIGRDAAKLYIDRYFARYPGVARYMDETRLVAHERGYVETVFGRRLWLPDING
GNGPRRQAAERAAINAPMQGTAADLIKLSMLAVQDWLDGSPSAGKPGAPMRTRQVMQVHD
ELVLEVPQEELSLVRERLPELMCGVASLRVPLVAEVGVGANWEEAH
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgggaatgtcggaaagtcaagaaacgctgttgctcgtcgatggctcgagttatctgtac
cgtgcttatcacgcactgcccgacttgcgcaatggagaagggtttcctaccggggccatc
tacggcatcgtgaacatgctgcgcaagctgcgcaacgactacccggccaagtatagcgct
tgcgttttcgacgctaaaggcaagaccttccgcgacgaactgtaccccgcctacaaggag
caccgggcgccgatgcccgatgacctgcgccagcagatcgagccgatccacgaagccgtg
cgcgcgctcggctggcccatcctgatggtcgacggcgtggaggccgacgacgtgatcggc
acgctggccgaacgcgccgcccgggagggcatccgcaccgttgtctcgaccggcgacaag
gacctcgcccaactggtgaacgaccatgtcacgctggtcaacaccatgagcaacgagacg
ctcgatccggccggcgtgctggccaagttcggcgtgccgcccgggaagatcgtcgattac
ctgtcgctgatcggtgacaccgtggacaatgtgccgggcgtgcccaaggtcggcccgaag
acggcggtcaagtggctgggcgaatacggctcgctcgacagcgtgattgcccgcgccggc
gagatcaagggcgtggtcggcgagaacctgcgcaacacgctcgactggctgcccaagggc
cgcgagctgctgaccgtgaagaccgactgcgatctcgccacggaagtcccgaccttcgag
gccctcgtcgatggcggcgaggatcgcgccaagctggtcgacttcttcggccgctacggc
ttcaagacctggctgcgcgaggccagcggcgaatcgctgccggatacccgcagcgtgggc
gcggcgcgcaaggccgccacgcccgtcaagcaatacgcaccggaggccgcggcgcagccg
caggccggcctgttcgacgtcgaagcgccgccggccgaagtcaaatacgaaaccgtcacc
accgaagcgcagctcgaatcgtggatgcggttgctggatgcgtccgagctggtctgcatc
gacaccgagaccacctcgatcgatccgatgctggcccagctggtgggcctttcgctgtcg
gtcgagccgggccaggcgtgctacatcccggtcgcgcatcgcggccccgatgtgtcgggg
ctggacgccgccgggcagctctcacgcgaggccgtgctggcgcgcatgaaaccgtggctg
gaggacgcggcccgcaagaaggtcggccagcatctgaagtacgacgcgcacgtgttcgcc
aaccatggcatcgcactgcgcggcatcgcgcacgacaccatgctgcagtcgtacgtgctg
gcctcgcaccgcaaccacggcatggacgcgctggccgagcgcgtgctgcacctgaagacc
atcacctacgaagaggtctgcggcaagggcgcgtcgcagatcggcttcgatgaggtgccg
ctcgaccgcgccacagaatacgccgccgaggacgccgacatcacgctgcgcctgcaccgc
gcgctgtatcccaaggtggccgaggacgacaagctgcgctacgtctacgagcagatcgag
atgccgacctccatcgtgctgcagaagatggagcgcaacggcgtgctgatcgatgccgag
cgcctggccagacagagcaccgggctgggccagcgcctgctggagctcgagcagcaggcc
tatgcgctggccggccagccgttcaatctgaactcgcccaagcagatcggcgagatcttc
ttcacgcagctcaagctgccggtcatcaagaagaccgccagcggtgcgccgtcgaccgac
gaagaggtgctgcagaagctggccgaggactacccgctgcccaagctgctgctcgatttc
cgcggcctggccaagctcaagtccacctataccgacaagctgccgaagatggtcaatccg
cagaccggccgggtccacaccacctacgggcaggcgaccgccgtcacgggccggctggcc
tcgaccgacccgaacctgcagaacatcccggtgcgcacggaagaagggcggcgcatccgc
gaagcgttcgtcgcgccggcgggcagcgtgatcgtctcggccgactactcgcagatcgag
ctgcgcatcatggcccacctgtccgaggacgaaggcctgttgcgcgccttccgcgagggc
caggacgtgcaccgcgccaccgcggccgaagtcttcggtgtgacgccgctggaggtcacg
gccgaacagcgccgctacgccaaggtcatcaacttcggcctcatctacggcatgagcgcg
ttcgggctggcgagcaacctcggcatcggccgcgatgccgccaagctttatatcgaccgg
tatttcgcgcgctatcccggcgtggcccgctacatggacgagacccgcctggtcgcgcac
gaacgcggctacgtcgagacggtgttcggccgccgcctgtggctgcccgacatcaacggc
ggcaacggtccgcgccgccaggccgccgagcgcgccgccatcaatgcgcccatgcagggc
accgccgccgacctcatcaagctgtcgatgctggccgtgcaggactggctggacggctcg
cccagcgccggcaagcccggcgcgccgatgcgcacgcgccaggtcatgcaggtgcacgat
gaactggtgctggaagtcccgcaggaagagctgtcgctggtgcgcgagcgcctgcccgag
ctgatgtgcggcgtggcgtcgctgcgtgtgccgctggtggccgaggtgggcgtcggcgcg
aactgggaagaggcgcactga
DBGET
integrated database retrieval system
