Ralstonia pseudosolanacearum GMI1000: RSc2365
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Entry
RSc2365 CDS
T00071
Name
(GenBank) putative orn/lys/arg decarboxylase, c-terminal;chey-like; protein
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Pathway
rso00330
Arginine and proline metabolism
rso01100
Metabolic pathways
rso01110
Biosynthesis of secondary metabolites
Module
rso_M00133
Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
RSc2365
Enzymes [BR:
rso01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
RSc2365
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GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
DegT_DnrJ_EryC1
DUF4350
Motif
Other DBs
NCBI-ProteinID:
CAD16072
UniProt:
Q8XWV5
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All DBs
Position
complement(2568237..2570516)
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AA seq
759 aa
AA seq
DB search
MKFRFPVIIIDEDFRSENISGSGIRALAQAIEEEGMEVTGLTSYGDLTSFAQQSSRASTF
IVSIDDDEFINPDNDKPEPEAVENLRSFVAEVRRRNANIPIFLYGETRTSRHLPNDILRE
LHGFIHMFEDTPEFVARHIIREARNYLDSLPPPFFKALIDYAQDSSYSWHCPGHSGGVAF
LKSPVGQVFHQFFGENMLRADVCNAVDELGQLLDHTGPVAASERNAARIFGSDHMFFVTN
GTSTSNKMVWHANVAPGDIVVVDRNCHKSILHAIMMTGAIPVFLMPTRNHYGIIGPIPQS
EFEPETIARKIAEHPFASQAANKKPRILTLTQGTYDGVLYNAERIKHMLSTEIDTLHFDE
AWLPHASFHPFYRDMHAIGQGRARSKDALVFATQSTHKLLAGLSQASQILVQDSETRKLD
TYRFNEAYLMHTSTSPQYSIIASCDVAAAMMEAPGGTALVEESIAEALDFRRAMRKVEQE
YVGTNGGNGRGDDWWFKVWGPNDLSDEGIEEREAWMLKANERWHGFGDLAEDFNLLDPIK
ATIITPGLDVDGKFSESGIPAAIVTKYLAEHGIIVEKTGLYSFFIMFTIGITKGRWNSMV
TELQQFKDDYDNNQPLWRVLPEFVRQYPQYERIGLRELCDAIHSVYKANDVARVTTEMYL
SNMEPAMKPSDAWAKMAHRETERVAIDDLEGRITAILLTPYPPGIPLLIPGERFNRTIVQ
YLQFAREFNKLFPGFETDIHGLVEEEIEGRVGYFVDCVR
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaaattccgttttcccgtcatcatcatcgacgaggacttccgctccgagaacatctcc
gggtcgggcattcgcgcgctggcgcaggccatcgaagaagagggcatggaggtcacgggc
ctgaccagctatggcgacctgacctcgttcgcgcagcagtcgagccgggcgtccaccttc
atcgtctcgatcgacgacgatgagttcatcaacccggacaacgacaagccggaaccggaa
gcggtggaaaacctgcgcagcttcgtggccgaagtgcgccgccgcaacgccaacatcccc
atcttcctgtacggcgagacgcgcacctcgcgccacctgcccaacgacatcctgcgcgag
ctgcacggcttcatccacatgttcgaggacacgccggagttcgtggcgcgccacatcatc
cgcgaagcccgcaactacctggattcgctgccgccgccgttcttcaaggcgctgatcgac
tacgcgcaggacagctcctactcgtggcactgcccggggcactcgggcggcgtggcgttc
ctcaagagcccggtgggccaggtgttccaccagttcttcggcgagaacatgctgcgcgcc
gacgtctgcaacgcggtggacgagctcggccagctgctcgaccacaccggcccggtggcg
gcctccgagcgcaatgccgcgcgcatcttcggctcggaccacatgttcttcgtcaccaac
ggcacgtccacctcgaacaagatggtgtggcacgccaacgtggcgcccggcgacatcgtg
gtggtggaccgcaactgccacaagtcgatcctgcacgcgatcatgatgacgggcgcgatc
cccgtgttcctgatgccgacgcgcaaccactacggcatcatcggcccgattccgcagagc
gagttcgagcccgagaccatcgcccgcaagatcgccgagcatccgttcgccagccaggcc
gcgaacaagaagccgcgcatcctgaccctcacgcagggcacgtacgacggcgtgctgtac
aacgccgagcgcatcaagcacatgctgtcgaccgagatcgacacgctgcacttcgacgag
gcctggctgccgcacgcctcgttccacccgttctaccgcgacatgcacgccatcggccag
ggccgcgcgcgcagcaaggacgcgctggtgttcgccacgcagagcacgcacaagctgctg
gccggcctgtctcaggcttcgcagatcctcgtgcaggattccgagacgcgcaagctcgac
acgtaccgcttcaacgaggcgtacctgatgcacacctcgaccagcccgcagtactcgatc
atcgcctcgtgcgacgtggccgcggcgatgatggaagcgccgggcggcaccgcgctggtg
gaagagagcatcgccgaggccctggacttccgccgcgccatgcgcaaggtggagcaggag
tacgtcggcacgaatggtggcaacggccgcggcgacgactggtggttcaaggtctggggc
ccgaacgacctgtccgatgaaggcatcgaggagcgcgaggcctggatgctcaaggccaac
gagcgctggcacggcttcggcgacctggccgaggacttcaacctgctcgacccgatcaag
gccaccatcatcaccccgggcctggacgtggacggcaagttcagcgagtcgggcatcccg
gcggccatcgtcacgaagtacctcgccgagcacggcatcatcgtcgagaagaccgggctg
tactcgttcttcatcatgttcaccatcggcatcaccaagggccgctggaactcgatggtg
accgagctgcagcagttcaaggacgactacgacaacaaccagccgctgtggcgcgtgctg
ccggagttcgtgcggcagtatccgcaatacgagcgcatcggcctgcgcgagctgtgcgac
gccatccacagcgtctacaaggccaacgacgtggcccgcgtgaccaccgagatgtacctc
tccaacatggagccggcgatgaagccgtcggacgcatgggccaagatggcgcaccgcgag
accgagcgcgtggccatcgacgacctggagggccgcatcaccgccatcctgctgacgccg
tatccgccgggcattccgctgctgatcccgggcgagcgcttcaaccggaccatcgtgcag
tacctgcagttcgcgcgcgagttcaacaagctgttcccgggcttcgagaccgatatccac
gggctggtggaggaggagattgagggtcgggttgggtactttgtcgactgcgtgaggtga
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