Ralstonia pseudosolanacearum GMI1000: RSc2392
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Entry
RSc2392 CDS
T00071
Symbol
cobD
Name
(GenBank) probable cobalamin biosynthesis cobd transmembrane protein
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Pathway
rso00860
Porphyrin metabolism
rso01100
Metabolic pathways
rso01240
Biosynthesis of cofactors
Module
rso_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RSc2392 (cobD)
Enzymes [BR:
rso01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
RSc2392 (cobD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CobD_Cbib
AmpE
PROCN
DinB_2
Motif
Other DBs
NCBI-ProteinID:
CAD16099
UniProt:
Q8XWS8
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All DBs
Position
2599557..2600552
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AA seq
331 aa
AA seq
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MTAWTGSVFDLGPMAIAAAALAGVGLDRLLGEAPRWHPLVGFGRVAAWIERGLNRRPAAR
VLSRAAGMVAWCLAVLPGVAIAAWITALAPDTARLGAWIADVVALYFAVGARSLRDHIAP
IAEALQAGDLPRARGLASRIVSRDLHDADEEAIARAAVESALENGSDAIFAPLFWLVVGG
APGVVLYRLANTLDAMWGYRNARFGRFGWAAARIDDVLNWMPARLTAASYALLGHTADAL
RCWRAQAPRWSSPNAGPVMASGAGSLRVQLGGMARYDGIDETRPPLGIGRPARAADIRRA
LALVSRTLGLWLAVLAAGGALAFAGLARQGL
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgtggacgggcagtgtcttcgatctgggcccgatggcgatcgccgccgccgcg
ctggccggcgtggggctggaccgcctgctgggcgaggcgccgcgctggcatccgctggtc
ggcttcggccgggtggccgcatggatcgagcgcgggctcaatcgccggcccgccgcgcgc
gtgctgtcccgcgcggccggcatggtggcgtggtgccttgccgtattgcccggcgtagcc
atcgccgcgtggatcaccgcgctggcgccggacacggcccggctgggcgcctggatcgcc
gacgtcgtcgcgctgtacttcgccgtcggtgcccgcagcctgcgcgaccacatcgcgccc
atcgccgaagcgctgcaggcgggcgacctgccccgcgcgcgcggcctggcctcgcgcatc
gtctcgcgcgatctgcatgacgcggacgaggaggccatcgcccgcgccgcggtggagtcg
gcgctggagaacggcagcgacgccatcttcgcgccgctgttctggctcgtcgtcggcggc
gcgcccggcgtggtgctgtatcgcctggccaataccctcgatgccatgtggggctatcgc
aatgcccgcttcggccgcttcggctgggcggccgcgcgcatcgacgacgtgctgaactgg
atgcccgcgcgcctgaccgccgcaagctatgcactgctcggccacaccgcggacgcgctg
cgctgctggcgtgcacaggcgccccggtggtcgagcccgaacgccggaccggtgatggcc
tcgggcgccggcagcctgcgcgtgcagctgggcggcatggcacgctacgacggcatcgac
gaaacccgcccgccgctcggcatcggccgccccgcccgcgccgcggatatccggcgcgcg
ctggcgctggtctcgcgcacgctcggtctctggctggcggtcctggcggcgggcggcgcg
ctggccttcgccggcctcgcgcggcagggcctatga
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