Ralstonia pseudosolanacearum GMI1000: RSc2505
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Entry
RSc2505 CDS
T00071
Name
(GenBank) putative transcription regulator protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Pathway
rso03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RSc2505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rso03000
]
RSc2505
03400 DNA repair and recombination proteins [BR:
rso03400
]
RSc2505
Enzymes [BR:
rso01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
RSc2505
Transcription factors [BR:
rso03000
]
Prokaryotic type
Helix-turn-helix
AraC family
RSc2505
DNA repair and recombination proteins [BR:
rso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RSc2505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
CAD16212
UniProt:
Q8XWG9
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All DBs
Position
2711629..2713101
Genome browser
AA seq
490 aa
AA seq
DB search
MHLDPDACYHAVQSRDRRFDGWFFVGVTSTGVYCRPICAVRTPLQKNCRFFASAAAAEKA
GFRPCLRCRPELAPGHSLAEMSSSLARAAARMIDEGFLQQHDLAALAAAVGVTDRHLRRI
FRAEFDVSPIEYAQTQRLLLAKRLLTDTAMPVGDVAYAAGFGSVRRLNSGFAEHYGFAPT
RLRTRAAPVSRGDDGATLMLGYRPPFAWHALLDFLRARAVDGVEVVDAHSYARTIALDYA
GRRHAGWLRARDVPQRHAIALTLSASLVQAMPPVLARVRRLFDLDCRPDLVDTHLGTLAA
GTPGLRVPGAVDGFEIAVRAIAGQVVSLARARRILARLAAAYGTPLAQPRAGLPTAFPSA
TALASVDPQALSGETGLQASRAAAMVEIARAIDAGRLRLEPLVPLAPTLAALQALSGIGE
WTAQYIAMRALGWPNAFPLGDYVLRKRLADHDGTLPTRHAMATRAEDWAPWRAYAAMHLW
HRDDAQAPTP
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcacctcgaccccgacgcctgctaccacgccgtgcaatcgcgcgaccggcgcttcgat
ggctggttcttcgtcggcgtcacctccaccggcgtctattgccgcccgatctgcgcggtg
cgcacgccgctgcagaagaactgccgcttcttcgcctccgccgccgcggccgagaaggcg
ggtttccgcccgtgcctgcgctgccgccccgagctggcgccgggccacagcctggccgag
atgtcatccagcctcgcccgcgccgccgcgcgcatgatcgacgaaggcttcctgcagcag
cacgatctggccgcgctggcggcagcggtgggcgtgacggatcgccacctgcgccgcatc
ttccgcgccgaattcgacgtctcgcccatcgagtacgcgcagacgcagcgcctgctgctc
gccaagcggctgctgacggacaccgccatgccggtcggcgacgtcgcatatgcggccggc
ttcggcagcgtgcggcggctcaacagcgggttcgccgagcactacggcttcgcgccgaca
cggctgcgcacccgcgccgcaccggtatcgcgcggcgacgacggcgccacgctgatgctg
ggttaccgcccgcccttcgcctggcacgcgctgctcgacttcctgcgcgcgcgtgccgtg
gacggcgtcgaggtggtcgacgcgcacagctacgcccgcaccatcgcgctcgactatgcc
gggcgccgtcatgccggctggctgcgcgcgcgcgacgtgccgcaacggcatgcgatcgca
ctcacgctgtcggccagcctggtgcaggcgatgccgccggtcctggcccgcgtgcgccgc
ctgttcgatctcgattgccggcccgacctggtcgacacgcacctcggcacgcttgccgcc
ggcacgcccggcctgcgcgtgccgggggcggtggacggcttcgagatcgccgtgcgcgcc
atcgccgggcaggtcgtttcgctggcgcgggcgcggcgcatcctggcccgcctggcggct
gcctatggcacgccgctggcgcagccgcgcgccggattgccgaccgccttcccgtccgcc
accgcgctggcgagcgtggacccgcaggcgctgtccggcgaaaccggcctgcaggccagc
cgtgccgccgccatggtggaaatcgcccgcgccatcgacgccggccgcctgcgcctggaa
ccgctggtgccgctcgcgcccacgctggcggcgctgcaagcgctgtccggcatcggcgaa
tggaccgcgcaatacatcgccatgcgcgcgctgggctggccgaatgcgtttccgctgggc
gactacgtgctgcgcaagcgcctggccgatcacgatggcacgctgccgacacgccacgcc
atggccacccgggcggaagactgggcgccatggcgcgcctatgccgccatgcacctgtgg
caccgcgacgatgcccaggctccgaccccatga
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