Ralstonia pseudosolanacearum GMI1000: RSc2521
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Entry
RSc2521 CDS
T00071
Symbol
hupB2
Name
(GenBank) probable dna-binding protein hu-beta (ns1) (hu-1)
KO
K03530
DNA-binding protein HU-beta
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rso03032
]
RSc2521 (hupB2)
03036 Chromosome and associated proteins [BR:
rso03036
]
RSc2521 (hupB2)
03400 DNA repair and recombination proteins [BR:
rso03400
]
RSc2521 (hupB2)
DNA replication proteins [BR:
rso03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RSc2521 (hupB2)
Chromosome and associated proteins [BR:
rso03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
RSc2521 (hupB2)
DNA repair and recombination proteins [BR:
rso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
RSc2521 (hupB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF6849
ABCA11_C
Motif
Other DBs
NCBI-ProteinID:
CAD16228
UniProt:
Q8XWF3
LinkDB
All DBs
Position
2728266..2728550
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AA seq
94 aa
AA seq
DB search
MTTKSELVAAIAKDAELSNAAAERALNSALENIKKTVAKGGTITLVGFGSFSSGKRAART
GRNPRTGEAIKIPATKTVKFTAGKGFKDAVNKKK
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccaaatccgaactcgtagccgccattgccaaagacgctgaactgagcaacgcc
gccgccgagcgcgcgctgaactccgcgctggaaaacatcaagaagaccgtcgccaagggc
ggcaccatcaccctggttggcttcggttcgttctcgtcgggcaagcgtgctgcgcgcacc
ggccgtaacccgcgcaccggcgaagccatcaagatcccggcgaccaagaccgtgaagttc
acggctggcaagggcttcaaggacgccgtgaacaagaagaagtaa
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