Ralstonia pseudosolanacearum GMI1000: RSc2527
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Entry
RSc2527 CDS
T00071
Symbol
xseA
Name
(GenBank) probable exodeoxyribonuclease vII large subunit (exonuclease vII large subunit) protein
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Pathway
rso03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RSc2527 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rso03400
]
RSc2527 (xseA)
Enzymes [BR:
rso01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
RSc2527 (xseA)
DNA repair and recombination proteins [BR:
rso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
RSc2527 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
EspB_PPE
Glyoxalase_8
Motif
Other DBs
NCBI-ProteinID:
CAD16234
UniProt:
Q8XWE7
LinkDB
All DBs
Position
complement(2734022..2735344)
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AA seq
440 aa
AA seq
DB search
MLSVSEVNRRIAGLLERHFALGWVRGEISNFTRAGSGHWYFSLKDAGAQIRCVMFKGRNQ
YADFTPREGEAIEVRALVTLYEARGELQLSVEAIRRAGLGNLYEAFLRLKAALEAQGLFD
AARKRPLPRHPHAIGVVTSLQAAALRDVLTTLHRRAPHVPVVVYPVPVQGAGAAERIAAM
LDLVNARAEVDVIILCRGGGSIEDLWAFNEEPVARAVAASDIPIVAGVGHETDVTIVDFV
ADVRAPTPTGAAELVSPDRARMLRDVAGCWDALSATLRRQLDRRAQTVDWLARRLRSPQA
QMRERRAGLAHLEGRLRFALHGRVQRAEHGQRLLAMRLDAARPDIARERTALQGIEAALA
RAMRATLDRAQTRLSHHQAGLELLAPQRTLERGYAVLLDAKGQAIRDPAALHARARIEAR
LARGAVDIEIAQVQPKLPEM
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
gtgctgtccgtctccgaggtcaaccggcgcatcgccgggctgctggagcgccactttgcg
ctcggctgggtgcgcggcgagatttcgaacttcacgcgcgccggcagcgggcactggtat
ttctcgctcaaggatgccggcgcgcagatccgctgcgtgatgttcaagggccgcaaccag
tacgccgatttcaccccgcgcgagggggaggcgatcgaggtgcgcgcgctggtcacgctg
tacgaggcgcgcggcgagctgcagttgagcgtcgaggccatccgccgggccggcctgggc
aatctgtacgaggccttcctgcggctcaaggcggcgctggaggcacaggggctgttcgac
gcggcgcgcaagcgtccgctgccgcgccatccgcatgcgatcggcgtggtgacctcgctg
caggcggcggcattgcgcgatgtgctgaccacgctgcatcggcgcgcgccgcatgtgccg
gtggtggtctatcccgtaccggtgcagggcgccggcgcggccgagcggattgcggccatg
ctcgatctcgtcaacgcgcgggccgaagtcgatgtgatcatcctgtgccggggcggcggc
agcatcgaagacctgtgggccttcaacgaagagccggtcgcgcgcgccgtggcggcctcg
gacattcccatcgtggccggcgtcggccatgagaccgacgtcaccatcgtcgatttcgtc
gccgacgtgcgcgcgcccacgccgaccggggccgccgaactggtcagccccgaccgcgcc
cgcatgctgcgtgatgtggcgggctgctgggacgcgctgtccgcgacgctgcgccggcag
ctggaccgccgcgcccagacggtcgactggctggcccgccgcctgcgcagcccgcaggcg
cagatgcgcgaacggcgcgccgggctggcgcatctggaaggccgcctgcgcttcgctctg
catggccgcgtgcagcgcgccgagcatgggcagcgcctgctggcgatgcggctggacgcc
gcccggccggacatcgcgcgcgaacgcaccgcgctgcagggcatcgaggccgcgctggca
cgcgccatgcgcgccacgctggaccgtgcgcagacccgcctgtcgcatcatcaggccggg
ctggaactgctggcgccgcagcgcacgctggagcgcggctacgcggtgctgctcgatgcc
aaggggcaggccatccgcgatccggccgcgctgcatgcgcgcgcgcgcatcgaggcgcgg
ctggcgcggggcgcggtcgatatcgagatcgcccaggtccagcccaagctgcccgagatg
tga
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