Ralstonia pseudosolanacearum GMI1000: RSc2532
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Entry
RSc2532 CDS
T00071
Symbol
kdsB
Name
(GenBank) probable 3-deoxy-manno-octulosonate (cmp-kdo synthetase)(cks) protein
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Pathway
rso00541
Biosynthesis of various nucleotide sugars
rso01100
Metabolic pathways
rso01250
Biosynthesis of nucleotide sugars
Module
rso_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RSc2532 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rso01005
]
RSc2532 (kdsB)
Enzymes [BR:
rso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
RSc2532 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
rso01005
]
Lipid A
RSc2532 (kdsB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
Motif
Other DBs
NCBI-ProteinID:
CAD16239
UniProt:
Q8XWE2
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All DBs
Position
2739468..2740274
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AA seq
268 aa
AA seq
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MSHAPFIAVIPARLASTRLPNKPLADIGGKPMVVRVAERAHQSSAARVVVATDAVSVADA
CMQHHIEAVLTRADHASGTDRLAEVATVLALPDDAIVVNVQGDEPLIAPTLIDNVAAHLR
DHADCAIATAAHPIRAAADIFNPNVVKVVLDAAERALLFSRAPLPWARDAWTPAALDQPA
AERPLPAMPVLRHIGIYAYRAAFLRRFPQLAAAPLEQTEQLEQLRAMWHGERIAVLTTDD
APAAGVDTAEDLARVRAAWSDLLSQDGP
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacgcgccgttcattgccgtcatccccgcgcggctcgcctccacgcggctgccc
aacaagccgctggccgacatcggcggcaagccgatggtggtgcgcgtggccgaacgcgcg
caccagtcgtcggcggcgcgcgtggtggtcgccaccgatgccgtctcggtggccgatgcc
tgcatgcagcaccatatcgaggcggtgctgacccgtgccgaccacgcgtcgggcacggac
cggctggcggaggtcgccaccgtgctggcgctgcccgatgacgccatcgtcgtcaacgtg
cagggcgacgaaccgctgatcgccccgacgctgatcgacaacgtggccgcgcacctgcgc
gaccacgccgattgcgccatcgccaccgccgcccatcccatccgcgccgccgccgacatc
ttcaacccgaacgtggtcaaggtcgtgctggacgccgccgagcgcgcgctgctgttctcg
cgcgccccgctgccctgggcgcgcgatgcctggacgcccgccgcgctggaccagcccgcc
gccgaacgcccgctgcccgccatgccggtgctgcgccatatcggcatctacgcctaccgt
gccgccttcctgcgacgcttcccgcagctggccgccgcgccgctggagcagaccgagcag
ctcgagcaactgcgcgccatgtggcacggcgaacgcatcgccgtgctgaccaccgacgat
gcaccggccgccggcgtcgatacggcggaagacctcgcccgcgtgcgcgcggcatggagc
gatttattgtcgcaggacgggccctag
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