Ralstonia pseudosolanacearum GMI1000: RSc2569
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Entry
RSc2569 CDS
T00071
Symbol
alkA
Name
(GenBank) probable dna-3-methyladenine glycosylase protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Pathway
rso03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RSc2569 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rso03400
]
RSc2569 (alkA)
Enzymes [BR:
rso01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
RSc2569 (alkA)
DNA repair and recombination proteins [BR:
rso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RSc2569 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
CAD16276
UniProt:
Q8XWA5
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All DBs
Position
2777509..2778147
Genome browser
AA seq
212 aa
AA seq
DB search
MSIAADLSERTYRQATAFLSSLDDDWARHIAAIGPCRHTAKPARDPYEALVRAIAYQQLH
ARAGDAILGRLLARYPGVDFPSPRQLLETDEATLRGCGFSATKLATIRGIAQATLDSIVP
TRDEALALPDEALIERLVTLRGVGRWTVEMLLIYTLERADILPADDFGVREGYRRLKRLE
TAPTRRQMAEIGRAWSPYRTVAAWYLWRMPAG
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcgccgccgacctgtccgaacgcacctaccggcaagccaccgcgttcctgtcg
tcgttggacgacgactgggcgcgccacatcgccgccatcggcccctgccggcacaccgcc
aagcccgcgcgcgacccgtacgaggcgctggtgcgcgccatcgcctatcagcagctgcat
gccagggccggcgacgccatcctcggccgcctgctggcgcggtatcccggtgtcgatttc
ccatcgccccggcaattgctggagaccgacgaggccacgctgcgcggctgcggcttctcg
gcgaccaagctggcgacgatccgcggcatcgcgcaggccacgctcgacagcatcgtgccc
acgcgcgacgaagcgctcgccctgccggacgaggcgctgatcgagcggctcgtcaccctg
cgcggcgtcgggcggtggacggtggaaatgctgctgatctacacgctggagcgcgccgac
atcctgcccgccgacgacttcggcgtgcgcgagggctaccgtcgcctcaagcgcctggaa
accgcccccacgcgcagacagatggcggagatcggccgcgcctggagcccctaccgcacc
gtcgccgcgtggtatctgtggcgcatgccggccggctga
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