Ralstonia pseudosolanacearum GMI1000: RSc2742
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Entry
RSc2742 CDS
T00071
Symbol
holA
Name
(GenBank) probable dna polymerase III (delta subunit) protein
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Pathway
rso03030
DNA replication
rso03430
Mismatch repair
rso03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RSc2742 (holA)
03430 Mismatch repair
RSc2742 (holA)
03440 Homologous recombination
RSc2742 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rso03032
]
RSc2742 (holA)
03400 DNA repair and recombination proteins [BR:
rso03400
]
RSc2742 (holA)
Enzymes [BR:
rso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RSc2742 (holA)
DNA replication proteins [BR:
rso03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RSc2742 (holA)
DNA repair and recombination proteins [BR:
rso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RSc2742 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
CAD16449
UniProt:
Q8XVT5
LinkDB
All DBs
Position
complement(2951677..2952753)
Genome browser
AA seq
358 aa
AA seq
DB search
MQLRLDALEGHLKQAGSKGLAPLYVVHGDEHLLVLEAVDALRQAARAQGFSEREVMTVER
GFSWSRVTEAQQSMSLFGDRKIVELRIPSGKPGKDGGEALRALAAGTPSGPAADTVTLIT
LPRLDFATAKSAWFAALEGAGVSIKVDSVDRAKLPGWIGERLARQQQRVEAGESGRRALQ
FIADRVEGNLLAAHQEIQKLGLLHPPGVLSFDAVHDAVLNVARYDVFKLSEAMLSGDVPR
LVRMLEGLRGEGEATVLVLWTLTEEIRVLSKIASGAAQGKPMASMLRELRVWGPRERLVP
QAVQRLSQPELEAALQMAARLDRQVKGLREPSLPAEPWDGLLQLAMRIARPHSLPVPV
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgcggctcgatgcgctggaaggccacctgaagcaggccgggtccaagggcctg
gcgccgctgtacgtggtgcacggcgacgagcacctgctcgtgctggaggccgtcgatgcg
ctgcgccaggcggcgcgcgcgcagggcttctccgagcgcgaggtgatgacggtcgagcgc
ggcttttcgtggtcgcgcgtgacggaggcgcagcagtcgatgtcgctgttcggcgaccgc
aagatcgttgagctgcggattccttccggcaagcccggcaaggacggcggcgaggcgctg
cgcgcgctggcggcgggcacgccatcggggccggctgccgacaccgtcacgctgatcacg
ttgccgcggctggactttgccaccgccaagtcggcgtggttcgcggcgctggagggcgcg
ggcgtgtcgatcaaggtcgattcggtggaccgcgccaagctgcccggctggatcggcgag
cgcttggcccgccagcagcagcgcgtggaagcgggcgagtccggccgccgcgcgctgcag
ttcatcgccgaccgcgtggaaggcaacttgctggccgcgcaccaggaaatccagaagctc
ggcctgctgcatccgcccggcgtgctgtccttcgatgccgtgcacgacgcggtgctcaac
gtggcgcgctacgacgtcttcaagctgtccgaggcgatgctgtcgggcgacgtgccgcgc
ctggtgcgcatgctcgaaggcctgcgcggcgagggcgaagccaccgtgctggtgctgtgg
acgctgaccgaggaaattcgcgtattatcgaaaatcgcctcgggcgcggcccagggcaag
ccgatggcctcgatgctgcgcgagctgcgggtctggggcccacgcgagcggctggtgccg
caggcggtgcagcggctgtcgcagccagagctggaggcggcgctgcagatggcggccagg
ctggaccggcaggtcaagggcctgcgcgagccgtcgctgcccgccgagccatgggacggc
ctgctgcagctggccatgcgcatcgcgcggccgcacagcctgccggttcccgtgtag
DBGET
integrated database retrieval system
