Ralstonia pseudosolanacearum GMI1000: RSc2887
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Entry
RSc2887 CDS
T00071
Symbol
ung
Name
(GenBank) probable uracil-dna glycosylase (udg) protein
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Pathway
rso03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RSc2887 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rso03400
]
RSc2887 (ung)
Enzymes [BR:
rso01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RSc2887 (ung)
DNA repair and recombination proteins [BR:
rso03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RSc2887 (ung)
Prokaryotic type
RSc2887 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CAD16594
UniProt:
Q8XVE4
LinkDB
All DBs
Position
3114046..3114846
Genome browser
AA seq
266 aa
AA seq
DB search
MTRRADPAQATLFDDDEPAGAPTATGGFVPLADQFDALPADWKALLGPCLARTDWPALCA
FVDGERAAGKPIFPTEVFHALHLTPVDAVRVIILGQDPYHGTGTVDGREVPQAHGLAFSV
PAGVRVPPSLRNIYKEIEAEYGRKLSAGSGNLEGWAQQGVLLLNTVLTVEQGQAASHARR
GWERITDCLLEHLARVGHARVFMLWGSHAQAKRALLPEGHLVLEAPHPSPLSAHRGFLGC
GHFRAANDWLAAQGQSTIDWLRPQAD
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgccgcgctgacccggcccaggccacgctcttcgacgatgacgaacccgccggt
gcgccgacggccacgggtggcttcgttccgctggccgaccagttcgatgcgttgcccgcc
gactggaaagcgctgctcgggccctgcctggcgcggaccgactggccggccttgtgcgcc
ttcgtcgacggcgaacgcgcggccggcaagccgatcttcccgaccgaggtcttccacgcc
ctgcacctgacgccggtcgacgcggtgcgcgtgatcatcctcggccaggatccgtaccac
ggcaccggcacggtcgatggccgcgaagtgccgcaggcgcacgggctggcgttctcggtg
cccgccggcgtgcgcgtgccgccgagcctgcgcaacatctacaaggaaatcgaggcggaa
tacggccgcaagctgtccgccggctccggcaacctggagggctgggcgcaacagggcgtg
ctgctgctcaacacagtgctgaccgtcgagcagggccaagccgcgagccacgcccggcgc
ggctgggagcgcatcacggattgcctgctggagcacctggcgcgcgtcggccacgctcgc
gtgttcatgctgtggggcagccacgcccaggccaagcgcgccttgctgccggaagggcat
ctggtgctcgaggcgccgcatccgtcgccgctgtcggcgcatcgcggcttcctggggtgc
gggcatttccgggccgccaacgactggctggcggcgcaggggcagtcgacgatcgattgg
ctccggccccaggcggactga
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