Ralstonia pseudosolanacearum GMI1000: RSc2993
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Entry
RSc2993 CDS
T00071
Symbol
rpoA
Name
(GenBank) probable dna-directed rna polymerase alpha chain (rnap alphasubunit) (transcriptase alpha chain) (rna polymerase alpha subunit) protein
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Pathway
rso03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RSc2993 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rso03021
]
RSc2993 (rpoA)
03400 DNA repair and recombination proteins [BR:
rso03400
]
RSc2993 (rpoA)
Enzymes [BR:
rso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RSc2993 (rpoA)
Transcription machinery [BR:
rso03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RSc2993 (rpoA)
DNA repair and recombination proteins [BR:
rso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RSc2993 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
CAD16702
UniProt:
Q8XV38
LinkDB
All DBs
Position
complement(3226071..3227051)
Genome browser
AA seq
326 aa
AA seq
DB search
MQTALLKPKIIAVEPLGDHHAKVVMEPFERGYGHTLGNALRRVLLSSMVGYAPTEVTIAG
VVHEYSTIDGVQEDVVNLLLNLKGVVFKLHNRDEVTVSLRKEGEGVVTAADIELPHDVEI
INPGHVIASLSAGGKLDMQIKVEQGRGYVPGNVRKFGDESSKVIGRIVLDASFAPVRRVS
YAVESARVEQRTDLDKLVMNIETNGVISPEEAIRQSARILVDQLSVFAALEGTESAAEAA
AARAPQIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNE
IKEVLASRGLTLGMKLENWPPAGLEK
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacagcactcctgaagcccaaaattattgcggttgagccgcttggcgatcatcac
gcgaaggtcgtcatggaaccgttcgagcggggctacggccatacgctcggcaacgcgctg
cgccgcgtgctgctgtcgtcgatggtcggctatgcgccgaccgaagtgacgatcgctggg
gtcgtccacgaatattccaccatcgatggcgtgcaggaagacgtcgtcaacctgctgctg
aacctgaaaggcgtggtgttcaagctgcacaaccgtgacgaggtcacggtgtcgctgcgc
aaggaaggcgaaggtgtggtcaccgcggcggacatcgagctgccgcacgatgtcgagatc
atcaatccgggccatgtcatcgccagcctgtcggccggtggcaagctggatatgcagatc
aaggtcgagcaaggccgcggctacgtgccgggcaacgtgcgcaagttcggcgacgagtcg
agcaaggtgatcggccgcatcgtgctggacgcctcgttcgcgccggtgcgccgcgtgtcg
tatgccgtcgagtccgctcgcgtcgagcagcgtaccgacctcgacaagctggtgatgaac
atcgagaccaacggcgtgatctcgcccgaggaagcgatccgccagtcggcgcgcatcctg
gtcgaccagctgtcggtgttcgcagcgctggaaggaaccgagagcgctgccgaagccgct
gccgcccgtgcaccgcagatcgatccgatcctgctgcgcccggtcgacgacctggagctg
accgtccgctcggcgaactgcctgaaggccgaaaatatttactatattggcgacctgatc
cagcgcaccgagaacgagctgctcaagaccccgaacctgggtcgcaagtcgctcaacgag
atcaaggaagtcctcgcttcgcgtggcctgacgctcggcatgaagctcgagaactggccg
cccgcaggcctggagaagtaa
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