Ralstonia pseudosolanacearum GMI1000: RSc3188
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Entry
RSc3188 CDS
T00071
Name
(GenBank) putative hemagglutinin-related protein
KO
K15125
filamentous hemagglutinin
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
rso00536
]
RSc3188
Glycosaminoglycan binding proteins [BR:
rso00536
]
Heparan sulfate / Heparin
Microbial pathogens
RSc3188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPS
CdiA_C
Fil_haemagg
Motif
Other DBs
NCBI-ProteinID:
CAD16976
UniProt:
Q8XUK0
LinkDB
All DBs
Position
complement(3446800..3455055)
Genome browser
AA seq
2751 aa
AA seq
DB search
MRQPVTARARAALEQPCAIAQQHCDRAGTADTASRHDRARRSFVARSIAAAVALISWLGP
VQVSWQAARQSAATIALHGTTVDSPFTSWRTTGRLLVRWGLRQAQAGAITDPTAPIRFTP
TLTQTTGQGGGVPVINVTTPNASGLSYNLLRSLTVDGIGLILNNSLAGGGTLLGGNVGGN
ANLATSGPASTILTQVTGTDPIRINGTVEVFGTPASVIFSAPAGIYTQGAGFTNTPRVTL
SSGTPQFLNGSGANVSFDQATAVGFLVNSGRIQIDPAAGSTAGAGIEGTVGAINLIGQTV
GVNAPLYAGNQINVIAGNQQVAPVATGTGRAGSDWQVSGAGANAAANSASAQNGLAIDAT
AFGAMTAGQIKLISTAQGLGVRAAGDLAANTSNVNIDANGDVSVGNVYGQQTAGITTTGS
VSTSGAVRAQQDVTIGAGGDVTLGGAAQAGNNVTVSAGGNVAGSGDLAAAKALNVSAGKS
VNLGGNLNAANIAVTAQGTGGTGDLTLGGNVSSPNTIQLNAARDASITGPLTTGGDLRLT
AGRDIAIGGAVQSTGASVLGAARDLHVAGTGSVTAGATTTATAGRNLGVDGTVSSRGDIR
LDAMDGQVASTGSLISDGGITATAGGANGDIALGGKVSAPGSVTLAAARNATVGGQLVTG
TDLTIGAKQDVAVTGAVQSVGATTLTGGRDIGIASTGAVIAGTTTTAAAGRHLLLLGSTA
SGGDTQLTATGVLATAGTVLAGGNVSASGQGGVALGGTVYATRGVTAQSGGGAIGVTGSV
IAHGGSAVLTGTDVTVSGTTQSSGDTALTATQGSVAVDGQSAAVGNLNISAAQDIAGQGT
TTSVGSTTLAAGRDIARTGGSQAAGNLTATAGNRLAMAALPVVGGDATLSGASVALGATG
KSSQIKGTLTATGAQGVTTAGTINAGSAKLTGGAVNNIGTVTASNTLTVTGSTITNSGTL
GGATTSVHGTDVANAGLIGGQTVSVTADNTLSNQNGTLLGTKSLAVAANTLTSNRNGVMF
AGSPSGTTAGQGDLSATVSGGNGSFNNAGGQILAGNNATINLRNQTVDGANLGTINANGA
LTYNVGAVANTGAWTVGGKSATINAANGIANTGSIQHACDLTLSTPGAVTNSGQIIAGND
LAVSGGGINNAAGATLHADHDLSVTGATTNRGTVEALNDVKIAGAGYDNAGALTQANRDL
NVNVSGNVLNQGGTIGAGRDVNLSAGQIINDATASGGASTTVVTGQEVNPTYLSQIVIGR
EQLSFSLPGSEPGSPDYMPIYRAVTIGDLKPDANGVIYGYLATELVRSLHDQYVDFWHLG
SMVDHPATALVTLPTVTRTETTTQAGVSGIIRAGRNLAVTASTLSNNGGQISAAGNITMA
VGALNNGASAGASKTITESIDGAVLNSFMAQLYDALHSGTKPMFSDAVMSDGCSDGCPTP
HWFVMQTQVVPGTFHTVPAATPPAPQVTVQQTAGKQGVIAAGGSIDLTQVGTLNNGGQIA
AAGNISLGGSVNNVGQQLVNRTTLPGCVGNPATCTNAVGNSFSGTSAGPWDSPTYDVIDP
KQQVASIVAGGTLTANAAQLTNQTGTITAAGNVLIAAPTVTNTGGTIQSKAGSVTINAAN
GLVNQAAPTTTVHQSHGSDVAPCGKSGSGNCDTATQTATGDAGMILAAGDLTVNAGSVRN
NGGAMVAGGNNTITTGSFDNSPVFLRQYYHWMFLDQDSNASDRWGCDSAGDISGCQRAFG
GNLRNGTNANAENAPTIGMLNSYVSGGNLTIRSGGAIINSGNIEGTAISLSGATITNGIT
NPSIQTPPSTSGRQVVSLGPIGTANAQLPVTGTPDTFSGPTTVVQQGVPNPSNPGTANGR
WQFNPVVVTTQSGGAVAWHFNTPLDGAAMSAPTASGSTAQYLSNSPATAVLGGVGPQTLI
NALPAALRPGGTPFYYDPQAENQRLDQAALAQTGRTSFINGLTYDSQTHLTADDQQKLIL
YQNAVDYAKAHNIQLGQALTPGQLAALDKPMLWYVTQQVPDPNCLSSACPMVSALVPQVY
LPQGYSGIEPGGSIVASKSLELLADNPIRNTGTLGSYGTLKTNTTIVNEQRAAEMTAAWQ
PIEDGWARTTGQQGQANSGFVFAANATDIAGQIRNINGVVAQLNADGTMSAAEAARVAAA
VQAGMQAVTSTHTDTFVRSPDVMGEIFAGVVIAAIAVMTGGALGPALSGLVSGTFGATVT
GGAVGSMTGSAIGQFAANDGINFGKLFTAGAVGALTAGIANGVTVGADGSLGAAVDWSQK
VADNSLAGLAGAQSVPGTTMTQAAGSTASNLAQRVEAILVLSGANAAVNTVAYGGSFGRA
FVSGLAANVAAAGAYAIGGALPGIGATGATPGSIAANIAMHGLLGCAAQSVINGNCAGGA
AGAMTSAIVAPLLRDALYGDTQTAFPNADGSVIDAYRNPVFNMVAVALSSMAGGAVANAL
GASATAGAAAAQNEALNNATADHTRPWDIIAAVFNKLTGGTYLINGGKAFFNTGADVIEA
GAKAVFAGMRDATAPPPPGTPDDLGGNGPGTAGGGAVQVTGGSPAVCWEPPVCQPGTPPV
VGGGYRPGGGSSPVIASEGNAGSSGSVNSGAAAGAANTGNVSIEPGASPDPNELRAGQGL
AGLGYDVAHQPTASSQGISNVRTADLSVRGVGQVDVYTPESGTSTNAIIRAIEKKADQAT
GVFVQADLSSADMASIAARTWGKPNAKSIQTLFFQRQDGTIVRFNRPVSGG
NT seq
8256 nt
NT seq
+upstream
nt +downstream
nt
atgcgccagccggtcacggcccgcgcacgcgctgcgttggagcagccgtgtgccattgca
caacaacactgcgatcgcgcaggtaccgcagacaccgccagccggcacgaccgcgccagg
cgctcgttcgtggcacggtccattgctgccgccgttgcgcttatcagctggctcggcccg
gtgcaggtctcctggcaggcggcccggcagagcgccgccacgattgcactgcacggcaca
accgtcgatagcccattcacatcgtggcgcaccacaggccgcctgctggtgcgctggggc
ctgcggcaagcgcaggctggcgccatcaccgatcccaccgcgccgatccgctttacgccc
accctcacgcagaccacggggcagggcgggggcgtcccggttatcaatgtcacaacgccg
aacgccagcggcctgtcgtacaacctgctgcgctcgctgacggtcgatggcatcggcctg
atcctgaacaacagcctggccggcggcggcacgctcctgggcggcaacgtcggcggtaac
gcgaacctggccacgtcgggcccggcctcgaccatcctgacgcaggtcacgggcaccgat
ccgatccgcatcaacggcacggtggaggtgttcggcacgccggccagtgtgatcttttcc
gcgccagcgggcatctatacgcagggcgcggggtttacgaacacgccacgggtgacgctg
tccagcggtacaccgcagtttctgaacggcagcggcgcaaacgtttcattcgaccaggcc
accgcggtgggcttcctggtcaatagcgggcgcatccagatcgacccagcggcgggctcc
acggccggtgcggggatcgagggcacggtcggggcgatcaacctgatcggccagacggtg
ggcgtcaatgcgccgctgtacgcgggcaatcagatcaacgtgatcgcggggaaccagcag
gtcgcgccggtggcgacgggcacgggccgggcgggttccgactggcaggtgagcggcgcg
ggcgccaatgcggcggccaacagcgcgagcgcgcagaacggcctggcgatcgacgcgacg
gcgttcggcgcgatgacggcggggcagatcaagctgatctcgacggcgcaggggctgggc
gtgcgcgccgccggcgacctggcggccaataccagcaacgtcaatatcgatgccaatggc
gatgtcagcgtcggcaatgtgtacgggcagcagaccgccggcattacgacgacggggtcg
gtgagcacgagcggcgccgtccgagcgcagcaggacgtgacgatcggggcgggcggcgac
gtgacgcttggcggtgcagcgcaggcgggcaacaacgtgactgtgagcgcgggcggcaat
gttgccggatcgggcgatctggctgcggccaaggcgctgaacgtgagcgcgggcaagagc
gtcaacctgggcggcaacctgaacgcggccaacattgccgtgacggcgcagggtacgggc
ggtacgggcgatctcacgctgggtgggaacgtgtcgtctccgaacaccatccagctgaac
gcggcgcgcgacgcttccattaccggtccgctgaccacgggcggcgatctgcgattgacg
gccggccgcgacatcgcgatcggcggcgcggtgcagagcacgggggcatcggtactcggc
gcggcccgcgatctccatgtcgccggtaccggttccgtcacggcgggcgcgacgacaacc
gcgacggctggccgcaacctgggtgtggacgggacggtttcctcccgcggcgatatccgg
ctcgatgccatggacggtcaggtggcatccacggggtcgctcatttccgatggcggcatc
acggctacggctggcggtgccaatggggacatcgctctgggcggcaaggtctcggcgccc
ggctccgtgacgctggccgccgcgcgcaatgcgacggttggcgggcagctcgtgaccggg
actgatttgacgatcggggccaagcaggatgttgccgtcacgggggcggtccagagcgtg
ggcgcgacgacgctcacgggtggccgggacatcggcatcgcgagcaccggcgccgtcatt
gcggggaccacgacaacggcggccgccggccgtcatctcctcctcttgggcagtacggcc
tcgggtggcgacacccagctgaccgcgacgggggtgctggcgaccgcgggtaccgtgctt
gcgggcggtaacgtcagtgcgagcgggcagggcggtgtcgccctgggcggcacggtgtat
gccacgcggggggtgacggcgcaatcgggcggtggcgccatcggcgttaccggcagtgtc
atcgctcacggcggtagcgccgtgttgaccgggacggatgtgaccgtctccggcacgacg
cagtccagtggggatacggcgctgaccgcgacccagggaagcgtggccgtcgacggtcaa
tccgctgcggtgggcaacctgaacatctccgccgcgcaggacattgccggtcaaggcacc
accactagcgtcggcagcaccacccttgccgcgggccgcgatattgcccgcacagggggc
agccaggcggcgggcaatctgaccgcgacggccgggaaccgtcttgccatggcggcactg
cctgttgtcggcggggatgccaccctgagcggggcgagcgtcgcgctgggggccaccggc
aagagcagccagatcaagggcacgctcaccgccaccggggcgcaaggtgtcacgacggcc
ggcaccatcaacgcggggtcggcgaagctgaccggcggtgcggtcaacaatatcggcacc
gtcacggcgtcgaacacgttgaccgtcaccggttccaccatcaccaacagcggcacgctg
ggcggtgcgacgaccagcgtgcacggtacggatgtggccaatgccggcctgatcggcggc
cagacggtcagcgtcacggcggacaacacgctcagcaaccagaacggcacgctgctcggt
accaagtcgctggccgtggccgccaacacgctgacgagcaaccgcaacggcgtgatgttc
gccggcagcccgtccggcactacggccgggcaaggcgacctgagcgccacggtgtcgggc
gggaacggcagcttcaataacgccggtggccaaatcctggccggcaacaacgccacgatc
aacctgcggaaccagaccgtcgacggcgcgaacctcggcaccatcaacgccaacggggcg
ctgacttacaacgtcggcgctgtcgccaacaccggcgcatggaccgtgggcggcaagagc
gcgaccatcaacgcagccaacggcatcgccaacactggctcgatccagcacgcgtgcgat
ttgacgctgagcacgcccggtgcggtgaccaacagcggacagatcatcgccggcaacgat
ctggcggtttcgggcggcggcatcaacaacgcggccggcgcgacgctgcacgccgatcat
gacctgtctgtcacgggtgccaccaccaaccggggcacggtcgaagcgctcaatgacgtc
aagattgccggggccggctatgacaacgccggcgcactgactcaggccaaccgcgacctc
aacgtcaatgtgtcgggcaacgtgctgaaccaggggggcacgatcggcgccgggcgcgat
gtgaatctgtctgccggtcagatcatcaacgatgcgaccgcgtcgggtggtgccagcacg
accgtggtgacggggcaggaggtcaatcctacgtacttgtcgcagattgtgatcggcagg
gagcagttgagtttctcgctcccaggcagtgagccaggtagtccggactacatgccgatc
tacagagcggtcacgatcggcgatctgaaaccggatgcgaacggggtcatctacggctat
ctggcgaccgaactggtacgcagtctgcatgaccagtacgtggacttctggcacctcggc
agcatggtcgaccatcctgctacggcgcttgtcacgctgccaaccgtgacgcggaccgag
acgacgacccaggctggtgtcagcggcatcattcgggcggggcgcaatctggcggtgacg
gcttctacgctgtccaacaacggggggcagatcagcgcagcgggcaatatcacgatggcc
gttggggcgctcaacaatggcgcatcggctggcgcgagcaagaccatcaccgaatccatc
gacggtgccgtgctcaatagcttcatggcgcagctctatgatgctctgcactccggcacc
aaaccgatgttctctgatgccgtcatgagcgacggttgctcggatggctgtcccacaccg
cattggtttgtcatgcagacccaggtggtgcccggcacattccacaccgtgccggcagcg
acgcctcccgcaccgcaagtcaccgtgcagcagaccgccggcaagcagggcgtcatcgcc
gccggcggcagcatcgatctgacgcaggttggcacgctgaacaacggcggacagatcgcc
gccgccggcaacatcagcttgggcggttcggtcaacaatgtcggccaacaactggtcaac
cgcaccacgctgcccggctgcgtcgggaatccggcaacgtgcaccaacgctgtcggcaac
agcttttccggcacttccgccgggccgtgggacagcccgacgtacgacgtcatcgatccc
aagcagcaggtcgccagcatcgtggcgggcggcacgctgaccgccaacgccgcccagctg
accaatcagaccggcaccatcaccgcggccgggaatgtcctgatcgcggcgcccaccgtc
accaacacgggcggtacgatccaatcgaaggccggttcggtcacgatcaatgccgccaat
ggcctggtcaaccaggccgcaccgacgaccacggttcaccagagccacggctcggatgtc
gcgccatgcggcaagagcggcagcggcaactgcgatacggccacgcaaaccgccaccggc
gacgccggcatgatcctcgccgcgggcgacctgaccgtcaacgccggttcggtgcgcaac
aacggcggcgccatggtggccggcggcaacaacaccatcaccacgggcagctttgataac
agcccggtcttcctgcggcagtactaccactggatgttcctggaccaggacagcaacgcg
agcgatcgctggggctgcgactcggcaggcgacatctccggttgccagcgggcctttggc
ggcaaccttcgcaacggcaccaacgccaatgccgagaacgcgcccaccatcggcatgctg
aactcgtatgtgagtggcggcaatctgaccatccgctcgggcggcgccatcatcaatagc
ggcaacatcgagggtacggcgatttcgctctcgggcgcgacgatcaccaacggcatcacc
aacccgtcgatccagacgccgccgtccaccagcggccggcaggtggtgagcctgggcccg
atcggtaccgccaatgcgcagttgccggtgacggggacgccggacaccttcagcggtccg
accacggttgtgcagcagggcgtaccgaacccgtccaacccgggcaccgcgaatgggcgc
tggcagttcaaccccgtcgtcgtgacgacccagagcggtggcgcggtggcatggcatttc
aatacgccgctcgatggcgcggcgatgagcgcgccgacggcgtccggctccacggcgcaa
tacctgtcgaacagccccgccacggcagtgctgggcggcgtcggcccgcagacgctgatc
aacgcgctgccggccgccctgcgccccggcggcacgccgttctactacgacccgcaggcc
gagaaccagcgcctggaccaggccgcgctggcccagaccggccgcaccagcttcatcaac
ggcctgacgtacgacagtcagacccacctgacggcggacgatcagcaaaagctgatcctg
taccagaacgccgtcgactacgcgaaggcgcacaacatccagttgggccaggccctgacg
ccgggccagctggccgcgctggacaagccgatgctgtggtacgtgacgcagcaggtgcca
gacccgaactgcctgagcagcgcgtgcccgatggtcagcgcgctggtgccgcaggtgtac
ctgccgcagggctacagcggcatcgagccgggcggcagcatcgtcgcgagcaagtcgctg
gagctgctggcggacaacccgatccgcaacacgggcacgctgggctcgtacggcacgctg
aagaccaacaccacgatcgtcaacgagcagcgcgcggcggagatgacggcggcgtggcag
ccgatcgaggacggctgggcgcgcacgacggggcagcaggggcaggccaacagcggcttc
gtgttcgcggccaatgcgacggacatcgcggggcagatccggaacatcaacggtgtcgtt
gcgcagttgaatgcggacggcacgatgagtgcggcggaggctgcacgggtggcggcggcc
gtgcaggcgggtatgcaggcggtgacgagcacgcataccgatacctttgtgcggtcgccg
gacgtcatgggcgagattttcgcgggcgtggtgatcgctgcaattgctgtgatgaccggc
ggggcgctgggcccggcgctgtctgggttggtgtccggcacgttcggcgcgacggttacc
ggtggcgcagtcgggtcgatgaccggctcggcaattggtcagttcgccgcgaacgatggg
atcaatttcggcaagctgttcacggcgggcgcagttggtgcgttgaccgcaggcatcgcc
aatggcgtgacggtcggtgcggacggctcgcttggcgcggcggtggattggagccagaag
gttgccgacaacagcttggcgggtctggccggtgcgcaaagtgtgccgggcacgaccatg
acgcaggcggcgggcagcacggcgagcaatctcgcgcagcgtgtcgaagccattctggta
ttgagcggcgccaatgcagctgtcaacaccgtagcgtacggcgggagcttcggccgggcg
ttcgtcagcggtctggcggcgaatgtggcggctgcgggcgcctacgcgattggtggcgcg
ttgcccggaatcggggcaacaggggcgacgccgggttcaattgcagcaaacattgccatg
cacggtttgcttgggtgtgctgcgcaaagcgttatcaatggcaattgtgcgggtggtgcg
gcaggcgcgatgacgagtgcgatcgtcgcgccactgctgcgcgatgcgctgtatggcgac
acgcagacagcgttcccgaatgcggatggctctgtgatcgacgcctatcgcaaccctgtt
ttcaatatggtggcggttgcgttgtcgagcatggcgggcggagcggtagccaacgcgttg
ggtgccagtgcgacggcgggagcggcggcggcgcagaacgaggcactgaacaatgctaca
gcagaccatacgcggccatgggacatcattgcggcggtattcaacaagttgacgggtggg
acgtacctgatcaatgggggaaaggcgttcttcaatacaggcgcagatgtcatcgaggcc
ggtgcaaaagcggtcttcgctgggatgcgtgatgcaacggcgccaccgccgccgggaacg
cccgacgatttgggcggaaacggccccggaacggccggaggtggcgcagtacaggtgaca
ggcgggtcgccggctgtttgttgggaaccgccggtctgtcaacctgggacgccgcctgtt
gtgggcggggggtatcggccaggtggagggagttcgccggtaattgcatcggaaggcaac
gcgggtagcagcggcagtgtcaattccggtgcagctgctggtgccgcaaacactggtaac
gtgagcattgaaccaggggctagccctgatcccaatgagctccgtgcaggacaaggtttg
gcaggcttgggatacgatgtcgcgcatcaaccaacggcctcttctcagggtatatcgaat
gtgcgaacagccgatctgtcagtgaggggcgttggtcaagttgacgtttatacgccggaa
agcggaacgtccacgaacgcgattattagagccatcgaaaagaaggcagatcaagctaca
ggggtttttgttcaagctgatctatcgagcgccgatatggcttcaatcgcggcacgcact
tggggaaagccaaatgcgaagtccatacaaactctatttttccagaggcaggatggaact
attgtgcgctttaaccgaccggtttcaggagggtaa
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integrated database retrieval system
