Ralstonia pseudosolanacearum GMI1000: RSc3266
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Entry
RSc3266 CDS
T00071
Name
(GenBank) probable of unknown function upf0011; transmembrane protein
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rso03009
]
RSc3266
Enzymes [BR:
rso01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
RSc3266
Ribosome biogenesis [BR:
rso03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
RSc3266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
Motif
Other DBs
NCBI-ProteinID:
CAD17054
UniProt:
Q8XUC5
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All DBs
Position
3518172..3519074
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AA seq
300 aa
AA seq
DB search
MSDPDWTLLAHDQHYPAGALYVVATPIGNAADVSLRARHVLGLADAVACEDTRNTGQLLH
RLGLSRPLLAAHEHNEREAAARIVERLARGERIAYVSDAGTPGVSDPGARIVEAVRAAGQ
RVIPLPGASAVVTALSAAGALLETSAGQFTFVGFLPPKAGQRDTAIRQWAAHGPAWVLYE
APHRIDATLAALAAHLPARRLLIGRELTKLFEQIVVLPAAEAPAWLAADASHGKGEFVLV
VEGAGAQEAAPTALAADQVLRLLLAELPAKRAAKLAGAITGAPVDALYQSALALKNDGRD
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgatcctgactggaccctgctggcgcatgaccagcactatcccgccggcgcatta
tatgtggtggccacccccatcgggaacgccgccgacgtgtcgctgcgcgcgcggcacgtg
ctcggcctggccgatgcggtggcctgcgaagacacgcgcaacaccggccagttgctgcat
cgcctgggcctgtcgcggccgctgctggcggcgcacgagcacaacgagcgcgaggcggcc
gcccgcatcgtggagcgcctggcgcgcggcgagcgcatcgcctacgtatcggacgccggc
acgccgggcgtgtcggacccgggcgcgcgcattgtcgaggccgtgcgcgcggccgggcag
cgcgtgattccgctgccgggcgcgagcgcggtggtgacggcgctgtctgcggcgggcgcg
ctgctggagacctccgccggccagttcaccttcgtcgggtttctaccgcccaaggcgggc
cagcgcgatacggccatccgccagtgggccgcgcacgggccggcctgggtcctgtacgag
gcgccgcatcgcatcgacgccacgctggcggcgctggcggcgcacctgcccgcgcggcgc
ctgctgatcggccgcgaactgaccaagctgttcgagcagatcgtcgtgctgccggccgcc
gaggcgcccgcctggctggccgccgacgcctcgcatggcaagggggagtttgtattggtg
gtggaaggcgcgggcgcgcaggaggcggcgcccaccgcgctggccgcggaccaggtgctg
cgcctgctgctggccgagctgccggccaagcgcgcagccaagctggccggggcgatcacc
ggcgcgccggtcgacgcgttgtaccagagcgcgctggcgctgaaaaacgacggacgggat
tag
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