Ralstonia pseudosolanacearum GMI1000: RSc3273
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Entry
RSc3273 CDS
T00071
Name
(GenBank) putative cog0624, acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase and related deacylases / peptidase m20; protein
Organism
rso
Ralstonia pseudosolanacearum GMI1000
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
CAD17061
UniProt:
Q8XUB8
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Position
complement(3523086..3524360)
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AA seq
424 aa
AA seq
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MTQADIAASGIDADIRAFVEAAHAQQVVFLRELVKVPSDNPSGDCAPHAARARALLEALG
LAVEAHPVPEAEVLAAGMVSATNLIVRHTFGRGGPTIALNAHGDVVPPGLGWTHDPYGGE
IVETEHGPTMFGRGVAVSKSDFATYTWALLALIEAERRGARLNGTVELHFTYDEETGGHI
GPKWLLDHGLTRPDYAISAGFAHGITSAHNGCLHAAVTVRGRQAHAAMPHTGLDAIEAAT
HILQAVYAYRAELATRTSAVPGIDHATLNVGLIQGGINTNVVPDRVTFRVDRRMIPEEAG
RDAEGELRAVIERAARERPGIAVSVERILLAEPLAELPGVQTLIAALRQQALAVFGGDVP
VHGVPLYTDARHYTAHGVPTVLYGAGPRTLMEARGHNTDENLRLSDLRGATVVVGCAVGA
LLGG
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgactcaggccgacatcgccgccagcgggatcgacgcggacatccgcgcattcgtcgag
gccgcgcacgcgcagcaggtcgtcttcctgcgcgaactggtgaaggtgccgtcggacaat
ccgtccggcgactgcgccccgcatgccgcgcgcgccagggcgctgctcgaggcgctcggc
ctcgcggtcgaggcgcatcccgtgcccgaggctgaagtgcttgctgccggcatggtcagc
gccaccaacctgatcgtgcggcacaccttcggccggggcgggccgaccatcgccctgaac
gcgcacggcgacgtggtgccgccgggcctgggctggacgcacgacccgtacggcggcgag
atcgtcgagaccgagcacggcccgaccatgttcggccgcggcgtggcggtttccaagtcg
gatttcgccacctacacgtgggcgctgctggcgctgatcgaagccgagcggcgcggcgcc
cggctcaacggcaccgtcgagctgcacttcacctacgacgaagaaacgggcggccacatc
ggcccgaaatggctgctggaccacggactgacccggcccgactacgccatctcggcgggg
tttgcccatggcatcacctcggcgcacaacggctgtctgcacgcggcggtcacggtgcgc
ggccggcaggcgcatgccgccatgccgcacaccggcctcgatgccatcgaggccgccacg
cacatcctgcaggccgtgtacgcctaccgcgccgaactggcgacgcggacgtccgccgtg
ccgggcatcgaccatgcgacgctcaatgtcggcctgatccagggcggcatcaacaccaac
gtcgtgccggatcgggtcacgttccgtgtcgaccggcggatgattccggaagaggccggg
cgcgatgccgaaggcgagctgcgcgccgtgatcgaacgcgcggcgcgcgagcggccgggg
atcgcggtgtcggtcgagcgcatcctgctcgccgagccgctggccgagctgccgggcgtg
cagacgctgatcgcggccctacggcagcaggcgctggcggtgttcggcggcgacgtgccg
gtgcacggcgtgccgctgtacaccgatgcgcgccactacacggcgcacggcgtgcccacc
gtgctgtacggcgccggcccccgcaccctgatggaagcccgcggccacaacactgacgag
aacctccggctgagcgacctgcgcggcgcgaccgtggtcgtgggctgcgcggtcggggcg
ctgctgggcggctga
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