Ralstonia pseudosolanacearum GMI1000: RSc3302
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Entry
RSc3302 CDS
T00071
Symbol
priA
Name
(GenBank) probable primosomal protein n' (replication factor y)
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Pathway
rso03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RSc3302 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rso03400
]
RSc3302 (priA)
Enzymes [BR:
rso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RSc3302 (priA)
DNA repair and recombination proteins [BR:
rso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RSc3302 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
ADDB_N
AAA_30
Bac_DnaA
Zn_ribbon_6
HypA
CDC48_2
AAA_19
DUF5817
Motif
Other DBs
NCBI-ProteinID:
CAD17090
UniProt:
Q8XU91
LinkDB
All DBs
Position
complement(3562909..3565215)
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AA seq
768 aa
AA seq
DB search
MTATRVDAAPPAVAQAARAGAIARVVIDTPLDAVFDYRCAQPVVPGQLVVVPFGSRRVVA
LVVESAGTTEVPADRLRDVERVLDWVPPLDAEWRALAEFAAGYYHRALGEVTLPALPPLW
RTPGSWDSLARHATETVYVMREPARAALLDSIPRRAAGAMRLAEALTGDGELSASAAVAL
HGQATAKLRDWAAVGWVGAELRPRPLLPVPRDLPPASVAPALNAEQAAAVEAIAQAGAGG
GFAPFLLYGVTGSGKTEVYLHAIADALARDPAAQVLMLVPEINLTPQLEARIAARFPGVP
LAALHSGLAEQPRALNWLAAHRGEARIVLGTRLAMLASLPHLALILVDEEHDTSYKQQEG
LRYSARDLALWRAKQRGIPVVLGSATPSLETWWRAEQGTTARLVLSQRAQADAVLPRVSL
IDLTLERRAGREIRDGLSRPLLDAVAGRLARGEQSLLFLNRRGYAPVLACDACGWLSGCP
RCSAYLVLHKPEHRLRCHHCGYESRIPHHCPDCGNVDIAPLGRGTQRIEETLGALFPQAR
VARIDADSTRRKGSAEALFDTVHEGAVDILIGTQMVAKGHDFQRVTLVGVVAPDASLFSH
DFRAGEHLFASLMQVAGRAGRAGLAGEVLIQTRYPDAPALLALVRHDYAGFARQLLRERK
QACLPPFAYQALLTAEHRELARALEFLGAARAAGQAVAEAQSLPVQLHDPVPMTMVRLAN
RERAQLLLESASRAALQRLLATWTDGFGDIGRTVKGVRWQLEIDPLRI
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctacccgtgttgatgccgctccgcccgccgttgcccaggcagcgcgcgcgggc
gccattgcgcgggtggtgatcgatacgccgctggatgccgtattcgactatcgctgcgcg
cagccggtcgtgccgggccagctggtggtggtgccgttcggcagccggcgcgtggtggcg
ctggtggtggagagcgccggcaccaccgaggtgccggcagaccgcctgcgcgatgtcgag
cgcgtgctcgactgggtgccgccgctggatgccgaatggcgcgcgctggccgaattcgcc
gcgggctactaccaccgggcgctgggtgaagtgacgctgccggcgctgccgccgttgtgg
cgtacgcccggcagctgggacagcctggcccgccatgccaccgagaccgtctacgtgatg
cgcgagccggcgcgcgccgccttgctcgacagcatcccccggcgggcggccggggcgatg
cgcctggccgaagcgctgacgggcgacggcgaactgtccgccagcgccgctgtcgcgctg
cacgggcaggcgacggccaagctgcgcgattgggccgcggtgggctgggtcggggcggaa
ctgcgtcccaggccgttgctgccggtgccgcgcgatctgccgccggcgtccgtcgcgccg
gcgctcaatgccgagcaggctgctgccgtcgaggccatcgcgcaggccggggcgggcggc
ggtttcgcgccgttcctgctgtacggggtcaccggcagcggcaagaccgaggtctacctg
cacgccatcgccgatgccctcgcgcgcgatccggccgcgcaggtgctgatgctggtgccc
gagatcaacctgacgccgcagctggaggcgcgcattgcggcgcgcttccccggcgtgccg
ctggccgcgctgcacagcggcctggccgagcagccgcgcgcgctgaactggctggcggcg
catcgcggcgaggcgcgcatcgtgctcggcacgcggctggcgatgctggcctcgctgccg
cacctcgcgctgatcctcgtcgacgaggagcacgacacgtcctataagcagcaagagggc
ctgcgctattccgcgcgcgatctggcgctgtggcgggccaagcagcgcggcatcccggtc
gtgctcgggtcggccacgccgtcgctggagacctggtggcgcgccgagcagggcaccacc
gcgcgcctggtgctgtcgcagcgcgcgcaggccgatgcggtgctgccgcgcgtctcgctg
atcgacctgacgctggagcgccgcgcgggccgggagatccgcgacgggctgtccaggccg
ctgctcgatgccgttgccgggcgcctggcgcgcggcgagcagagcctgctgttcctcaac
cgccgcggctacgcgccggtgctggcgtgcgacgcctgcggctggttgtcgggctgcccg
cgctgctcggcgtatctggtgctgcacaagccggagcaccggctgcgctgccaccactgc
ggctacgaatcgcgcatcccgcaccattgcccggactgcggcaacgtcgacatcgcgccg
ctggggcgcggcacgcagcgcatcgaggagaccctcggcgcgctgtttccgcaggcgcgc
gtggcgcgcatcgacgccgactccacccgccgcaagggcagcgccgaggcgctgttcgac
accgtgcacgaaggggccgtcgatatcctgatcggcacgcagatggtcgccaaggggcac
gactttcagcgcgtgacgctggtgggcgtggtggcgcccgatgcgtccctgttcagccac
gacttccgtgccggcgagcacctgttcgcctcgctgatgcaggtggccgggcgcgccggc
cgtgccgggctggcgggcgaagtgctgatccagacccgctacccggatgcccccgccctg
ctggcgctggtgcggcacgattacgccggcttcgcgcgccagctgctgcgcgagcgcaag
caggcctgcctgccgccgttcgcctaccaggcgctgctgaccgccgagcaccgcgagttg
gcgcgcgcgctggaattcctcggcgccgcgcgcgcggccgggcaggccgtggccgaagcc
cagagcctgccggtgcaactgcacgatccggtgcccatgaccatggtgcgcctggccaac
cgcgaacgcgcccaactgctgctcgaaagcgcttcgcgcgccgccctgcagcggctgctg
gccacctggaccgacgggtttggcgacatcggccggacggtcaagggcgtgcgctggcag
ctcgagatcgacccgctgcggatctga
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