Ralstonia pseudosolanacearum GMI1000: RSc3303
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Entry
RSc3303 CDS
T00071
Symbol
hemE
Name
(GenBank) probable uroporphyrinogen decarboxylase (uro-d) (upd) protein
KO
K01599
uroporphyrinogen decarboxylase [EC:
4.1.1.37
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Pathway
rso00860
Porphyrin metabolism
rso01100
Metabolic pathways
rso01110
Biosynthesis of secondary metabolites
rso01240
Biosynthesis of cofactors
Module
rso_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RSc3303 (hemE)
Enzymes [BR:
rso01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.37 uroporphyrinogen decarboxylase
RSc3303 (hemE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
URO-D
Motif
Other DBs
NCBI-ProteinID:
CAD17091
UniProt:
Q8XU90
LinkDB
All DBs
Position
complement(3565798..3566892)
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AA seq
364 aa
AA seq
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MSAPLANDTFLRALRRQPTEYTPLWLMRQAGRYLPEYNATRARAGSFLGLAKSPAYATEV
TLQPLDRYPLDAAILFSDILTVPDAMGLGLSFEQGEGPRFARPVRSEADVAALSVPDMAS
LQYVFDAVSEIRRALVQDGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKSMLYARPD
LMHRILEINAAAVIDYLNAQIDAGAQAVMVFDTWGGALADGIYQTFSLAYMARVVEGLRA
GADGQRVPVILFTKGGGLWLESMAQTGADALGVDWTVNLQLARVRTGGRVALQGNLDPTV
LFAEPDAIRAQVRRVLEDYAAGGDSDGHVFNLGHGISQFTPPESVAVLVDEVHTFSRALR
TRLP
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcaccgctcgccaacgacaccttcctgcgtgccctgcgccgccagcccaccgaa
tacacgccgctgtggctgatgcgccaggcgggccgctacctgcccgagtacaacgccacg
cgcgcgcgcgccggcagcttcctgggcctggccaagtcgccggcctatgccaccgaggtg
acgctgcagccgctggaccgctatccgctggatgccgccatcctgttctccgacatcctg
accgtgcccgatgcgatgggcctggggctgtcgttcgagcagggcgaaggtccgcgcttc
gcgcgaccggtgcgctccgaggcggacgtggccgcgctgtcggtgcccgacatggcctcg
ttgcaatacgtcttcgatgcggtgtcggaaatccgccgcgcgctggtgcaggacggccgc
cagcgcgtgccgctgatcggcttctcgggcagcccgtggacgctggcctgctacatggtc
gaaggcggcggctcggacgacttccgcaccgtcaagtcgatgctctacgcgcgcccggac
ctgatgcaccgcatcctggaaatcaacgcggccgccgtgatcgactacctgaacgcgcag
atcgacgctggcgcccaggccgtgatggtgttcgacacctggggcggcgcgctggccgac
ggcatctaccagacgttttcgctggcctatatggcgcgcgtggtggaaggcctgcgcgcc
ggcgcggacggccagcgtgtgccggtgatcctgttcaccaagggcggcgggctgtggctc
gaatcgatggcccagaccggcgccgatgcgctgggcgtggactggacggtcaacctgcag
ctggcgcgcgtgcgcaccggcggccgggtggcgctgcagggcaacctcgacccgaccgtg
ctgttcgccgagccggatgccatccgcgcgcaggtgcgccgggtgctggaggactatgcc
gccggcggcgacagcgatggccatgtgttcaacctcggtcacggcatctcgcagttcacg
ccgccggagtcggtggcggtgctggtggacgaagtgcacaccttcagtcgcgcgctgcgg
acccgcttgccgtag
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