Ralstonia pseudosolanacearum GMI1000: RSp0048
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Entry
RSp0048 CDS
T00071
Symbol
soxA1
Name
(GenBank) probable sarcosine oxidase (alpha subunit) oxidoreductase protein
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Pathway
rso00260
Glycine, serine and threonine metabolism
rso01100
Metabolic pathways
Module
rso_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RSp0048 (soxA1)
Enzymes [BR:
rso01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
RSp0048 (soxA1)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
RSp0048 (soxA1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
FAD_oxidored
Pyr_redox_2
Pyr_redox_3
NAD_binding_8
FAD_binding_2
HI0933_like
DAO
FAD_binding_3
GIDA
NAD_binding_7
Thi4
Pyr_redox
AlaDh_PNT_C
XdhC_C
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
CAD17199
UniProt:
Q8XTQ8
LinkDB
All DBs
Position
megaplasmid:51971..55057
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AA seq
1028 aa
AA seq
DB search
MSQKDRLGTGGRINRANPLTFTFNGRTYQGFQGDTLASALLANGVHFVARSFKYHRPRGI
MTAGVEEPNAVVQLESGPYSVPNARATEIELYQGLVANSVNAEPSLENDRYAINQKFSRF
LPAGFYYKTFMWPRKMWPKYEEKIRGAAGLGKAPDMRDADRYDKCYAHCDVLVVGGGPTG
LAAAHAAATAGARVILVDDQRELGGSLLSCRAEIDGKPAQQWVEKIEAQLRKLPDVTILT
RSTAFGYQDHNLITVTQRLTDHLPISMRKGTRELLWKVRAKRVILATGAHERPLVFGNND
LPGVMIAGAVSSYIHRYGVLPGREAVVFTNNDRAYQTALDLKACGAKVTVVDSRAATDGA
LPAAAKRQGVTVMNGAVITTASGKWRVSSVDVASYANSNGAVVTAAPAQMRVSSADVAAY
QGGQVGGKIKTLPCDIVATSGGFSPVLHLFAQSGGKAQWDDAKACFVPGKPMQAEVSVGA
AAGKFTLAEALKLAVDAGAEAARIAGFAAAQRPVAPKVTDVKESALQPLWLIGDTKSATR
GPKQFVDFQNDVAVTDILLAAREGFESVEHVKRYTAMGFGTDQGKLGNINGMAILAQALG
KTIPETGTTTFRPNYTPVTFGTFAGRELGNFLDPVRKTCVHEWHVEHGALFEDVGNWKRP
WYFPKKGEDLHAAVKRECLAVRNSVGILDASTLGKIDIQGPDAVKLLNWMYTNPWGKLEV
GKCRYGLMLDENGMVFDDGVTVRLADQHFMMTTTTGGAARVLTWLERWLQTEWPDMRVRL
ASVTDHWATFAVVGPKSRKVVQKVCQDIDFGNEAFPFMSYRNGTVAGAKARVMRISFSGE
LAYEVNVPANAGRAVWEALMAAGAEFDITPYGTETMHVLRAEKGYIIVGQDTDGSITPHD
LGMGGMVAKTKDCLGKRSLTRSDTAKEGRKQFVGLLTDDAQFVLPEGAQIVTNGTQVSAE
SPTPMVGHVTSSYYSPILKRSIALAVVKGGLSKMGESVVIPLANGKRVTAKISSPVFYDT
EGGRQHVE
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaaagaccgtctcggtacgggtggccgtatcaaccgcgcaaatccgttgacg
ttcacgttcaacggccgtacgtatcaaggtttccagggcgatacgctcgcgtcggcactg
ctggcgaatggcgtgcatttcgtggcacgcagcttcaagtaccaccgcccgcgcggcatc
atgaccgcaggtgtggaagaaccgaatgcagtggtgcagcttgagtcaggcccctacagc
gtgccgaacgcgcgcgcgacagagatcgagctgtatcagggcctggttgccaacagcgtg
aatgcagaaccctcgctggagaacgaccgctacgcgatcaaccagaagttctcgcgcttt
ctgccggccgggttctactacaagaccttcatgtggccgcgcaagatgtggcccaagtac
gaagagaagattcgcggagcggcaggcttgggtaaggcgcccgacatgcgcgatgccgat
cgctatgacaagtgctacgcgcactgcgacgtgctggtcgtgggcggtgggccgaccggc
ctggcggctgcacatgccgcagcaacggccggcgcacgcgtgattctcgtggatgaccag
cgcgaactcggcgggagcctgctctcgtgccgagcggaaatcgacggcaagccggcgcag
cagtgggtggaaaagatcgaggcccagctgcgcaagctgccggatgtgaccatcctcacg
cggagcacggcgttcggctatcaggaccacaacctcattacggtgacgcagcgcctgacc
gatcacctgccgatttcgatgcgcaagggcacgcgtgagctgctgtggaaggtgcgcgcc
aagcgggtcatcctggcgaccggcgcgcacgaacgcccgctcgtgttcggcaacaacgat
ctcccgggcgtgatgatcgcaggggcggtgtcttcgtacatccatcgctatggcgtgttg
cccggccgcgaagccgttgtgttcacgaacaacgaccgcgcttaccaaaccgcgctggat
ctgaaggcgtgcggcgcgaaggtcacggttgtggactcgcgtgccgctaccgacggagca
ctgcccgctgctgcgaagcggcaaggcgtgacggtgatgaacggcgcggtgatcaccact
gcctccggcaagtggcgcgtatcgtcggtcgatgttgcctcgtacgcgaactcaaacggc
gcggtcgtcacggcggccccggcgcagatgcgcgtgtcatcggccgatgtggcggcctac
caaggcgggcaagtcggcggaaagatcaagacgctgccctgcgatatcgtcgcgacatcg
ggaggcttcagtcctgtcttgcacctcttcgcacaatcgggcgggaaggcgcagtgggac
gatgcaaaggcgtgttttgtacccggcaagcccatgcaggcggaagtgagtgtgggggct
gcggcgggaaagttcacgctcgcagaggccttgaagcttgccgtggacgcaggcgccgag
gcggcaaggattgctggtttcgccgctgcacaacgccccgtcgcaccgaaagtgacggat
gtgaaggaaagcgcgctgcagccgctctggctcatcggggataccaagtccgccacacgt
gggccgaagcagttcgtcgatttccagaacgatgtggcagtgaccgacatcctgcttgcc
gcgcgcgagggtttcgaatcggtcgagcacgtcaagcgctatacggccatgggcttcggc
accgatcagggcaagctgggcaacatcaacgggatggccattcttgcgcaggcgttgggt
aagacgatcccggaaaccggcacgaccacgtttcgcccgaactacacgcccgtcacgttc
ggtacgttcgccgggcgcgaactgggcaatttcctcgacccggtccgcaagacctgcgtt
cacgaatggcacgtcgagcacggtgcgctgtttgaggacgtgggcaactggaagcgcccc
tggtacttcccgaagaagggcgaagacctgcatgcggcggtcaagcgggaatgccttgcg
gtgcgcaacagcgtcggcattctggatgcctccacgcttggcaagatcgacatccagggc
ccggatgcggtgaagctgctcaactggatgtacaccaacccgtggggcaagctcgaagtc
ggcaaatgccgctatgggttgatgctcgacgagaacggcatggtgttcgacgacggcgtg
accgtacgcctggccgatcagcatttcatgatgacgaccacgacgggtggtgcggcccgc
gtactgacctggctcgagcgctggctgcaaaccgaatggcccgacatgcgggtgcggctc
gcgtctgtcaccgatcactgggcgacgtttgcggtggtcggccccaagagccgcaaggtg
gtgcagaaggtctgtcaggacatcgacttcggcaacgaggcgttcccgttcatgagctac
cggaacggcaccgtggccggcgcaaaagcccgcgttatgcggatcagcttctcgggcgaa
ctggcctacgaagtgaacgtgccggccaatgcgggccgcgccgtgtgggaagcgttgatg
gccgcgggcgccgagttcgacatcacgccatacggcaccgaaaccatgcacgtgctgcgt
gccgagaagggctacatcatcgtcggccaggacacggatgggtcgatcactccgcacgac
ctgggcatgggcggcatggtcgctaagacgaaggactgcctcggcaagcgctcgctcacg
cggtcggacaccgccaaggagggccgcaagcagtttgtcggcctgctgaccgatgacgca
cagttcgtgttgcccgaaggcgcgcagatcgtcaccaacggcacgcaggtttctgcagag
agcccgacaccgatggtcggccacgtgacgtcgagctactacagcccgatcctgaagcgg
tcgattgcgctggcggtggtcaagggtggcctgagcaagatgggcgagagcgtggtgatt
ccgctggccaacggcaagcgcgtcaccgcgaagatctcgagcccggttttctacgatacg
gaaggggggcgccaacatgtggaatga
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integrated database retrieval system
