Ralstonia pseudosolanacearum GMI1000: RSp0292
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Entry
RSp0292 CDS
T00071
Name
(GenBank) probable typeIsecretion system, atp-binding transmembrane abc transporter protein
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Pathway
rso02010
ABC transporters
rso03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RSp0292
03070 Bacterial secretion system
RSp0292
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rso02000
]
RSp0292
02044 Secretion system [BR:
rso02044
]
RSp0292
Transporters [BR:
rso02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
RSp0292
Secretion system [BR:
rso02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
RSp0292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
ABC_ATPase
AAA_16
AAA_29
AAA_22
AAA_18
AAA_21
DUF87
PRK
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
CAD17443
UniProt:
Q8XT23
LinkDB
All DBs
Position
megaplasmid:complement(379620..381797)
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AA seq
725 aa
AA seq
DB search
MTSTSIDTPATPGPDPTRAEKIDTALACILMMARLHGIAAEEAQLRHEFGHRTFETQTAL
LAAKHLGLSAKVVRQPAERLHRAPLPAIAIDRSGQHFILAKYDASNADEPKLLVQRPGQP
PSVLTLQDFLAAWSGELILCTSKANFAGDMAKFDFTWFIPAVIKYRKLLGEVLLVSLTLQ
IIGLVTPMFFQVVMDKVLVNHAMKTLNVIAVGLICAILFEVTLTSIRTWVFAHTSSKIDV
ELGARLFRHLLSLPLAYFQSRRVGDSVARVRELENIRSFLTGNAMTVVLDLLFSFVFLAV
MLWYSVWLTLIVVVSIPLYIGLSAVFTPIIRARLDVKFNRNAENQSFLVETISGIDTVKA
MAVEPRWTHKWDQQLAAYVTAGLAVTNVATVASGGVTLVSKLVTAAIMWLGATLVIDHKM
TVGELVAFNMLAGQVSSPILRLAQLWNDFQQVGISMSRLGDILNARTEVAGQKSRLPKLA
GAIAFDQVAFRYRPDAPDVIRGISLAIAPGEVIGIVGRSGSGKSTLTKLVQRLYVPERGR
VLIDGQDIAIVDTTSLRQQIGVVLQENTLFSRSIRDNIALTNPAAPLEAIIEAARLAGAH
EFICELPEGYDTIVGEHGTGLSGGQRQRIAIARALLTNPRILIFDEATSALDYESEKIIQ
DNMRRICQGRTVLIIAHRLSAVREANRIIVMERGQIAEMGSHDQLLKHPQGIYAHLYALQ
QGGAA
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcacctccatcgacacccctgccacaccagggcccgaccccacgcgcgcggag
aagatcgacaccgccctggcctgcatcctgatgatggcccgcctgcacggcatcgccgcg
gaggaagcccagttgcgccatgagttcggccaccgcacgttcgagacgcagacggcgctg
ctggccgccaagcatctgggcctgtcggccaaggtggtgcgccagccggcggagcggctg
caccgggcgccgctgccggctatcgccatcgaccggtccggccagcacttcatcctggcc
aagtacgacgcgtccaatgccgacgagcccaagctgctggtccagcggcccggccagccg
ccgagcgtgctgacgctgcaggactttctcgcggcgtggtcgggtgagctgatcctgtgc
accagcaaggcgaacttcgccggagacatggcgaagttcgacttcacctggttcattccc
gccgtcatcaagtatcgaaagctgctgggcgaagtcctgctggtgtcgctcacgctgcag
atcatcgggctggtgacgccgatgttcttccaggtggtgatggacaaggtgctggtcaat
cacgccatgaagacgctgaacgtgatcgccgtcggcctgatctgcgcgatcctgttcgag
gtgacgctcaccagcatccgcacctgggtgttcgcgcataccagcagcaagatcgacgtg
gaactcggcgcgcggctgttccggcatctgctgagcctgccgctggcgtatttccagtcg
cggcgcgtgggcgattcggtggcgcgggtgcgcgagctggagaacatccgcagcttcctg
accggcaacgccatgacggtggtgctggacctgctgttctcgttcgtgttcctggcggtg
atgctgtggtacagcgtgtggctgacactgatcgtggtggtgtcgattccgctgtatatc
gggctgtcggcggtgttcacgcccatcatccgcgcgcggctggacgtgaagttcaaccgc
aatgccgagaaccagtcgttcctggtggagaccatcagcggcatcgataccgtcaaggcg
atggccgtggagccgcgctggacgcacaagtgggatcagcagctcgccgcgtacgtcacc
gccgggctggcggtgaccaacgtggcgacggtcgccagcggcggcgtcacgctggtcagc
aagctggtgacggcggccatcatgtggctcggggcgacgctggtgatcgaccacaagatg
accgtgggcgagctggtggccttcaacatgctggccgggcaggtgtcgtcgcccatcctg
cggctggcccagctgtggaacgatttccagcaggtggggatttcgatgagccggctgggg
gacatcctgaacgcgcgcaccgaggtcgccggccagaaatcgcgcctgccgaaactggcc
ggcgcgattgcgttcgaccaggtggccttccgctaccggcccgatgcgcccgatgtcatc
cgggggatttcgctcgcgatcgcgccgggcgaggtgatcggcatcgtcggccgctcggga
tcgggcaagagcacgctgaccaagctggtgcagcgcctgtacgtgccggagcgcgggcgc
gtgctgatcgacgggcaggacatcgccattgtcgatacgacttcgctgcggcagcagatc
ggcgtggtgctgcaggagaacacgctgttcagccgctccatccgcgacaacatcgccctg
acgaatccggcggcgccgctggaggccatcatcgaggcggccaggctggccggcgcgcac
gagttcatctgcgagctgccggaaggctacgacacgatcgtcggcgagcacggcaccggc
ctgtcgggcgggcagcgccagcgcatcgcgattgcgcgcgcgctgctgacgaatccgcgc
atcctcatcttcgacgaggcgaccagcgcgctggactacgagtcggagaagatcatccag
gacaacatgcggcgcatctgccaggggcgcaccgtgctgatcattgcgcaccggctgtcg
gcggtgcgcgaggccaaccgcatcatcgtcatggaacgcggccagatcgcggaaatgggc
agccatgaccagttgctgaaacatccgcagggcatctacgcgcatctgtacgccctgcag
cagggaggtgcggcatga
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