Ralstonia pseudosolanacearum GMI1000: RSp0336
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Entry
RSp0336 CDS
T00071
Name
(GenBank) probable transcription regulator protein
KO
K03710
GntR family transcriptional regulator
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rso03000
]
RSp0336
Transcription factors [BR:
rso03000
]
Prokaryotic type
Helix-turn-helix
GntR family
RSp0336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_DeoR
HTH_Crp_2
TrmB
HTH_20
DUF5817_CT
Rrf2
MarR_2
HTH_64
DUF6429
FaeA
OpcA_G6PD_C
DIP2311-like_C
RTX
HTH_36
Motif
Other DBs
NCBI-ProteinID:
CAD17487
UniProt:
Q8XSY1
LinkDB
All DBs
Position
megaplasmid:442575..443303
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AA seq
242 aa
AA seq
DB search
MTPRLPKYLELADRIRLDILHGALPAGSVAPSENEVAQCYGVSRLTARRTLNELAQRGLL
KRSRGQRSVVLDRAGPHRPVLYAPGQSDAALEYVPGAVYSVSAFRQETADATVAAALDLQ
VGAPVAHVERRARVDGAPIMLLRTWLTSRLAAMLEARDFEDRLFVQVFQRANLTIARSRE
APLACVADAHQARELDVAPGVPLVRVRRIGYSVADVPISLTYCDFSPERYTREVDIRVLQ
TD
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgacgcctcgcctgcccaaataccttgaactggctgaccgcatccggctcgatatcctg
cacggtgccttgccggccggcagtgtcgcgcccagcgagaacgaagtcgcgcagtgctac
ggcgtgtcgcgcctgaccgcgcgtcgtacgctcaacgagctggcgcagcgcggcctgctc
aagcgctcgcgcgggcagcgcagcgtggtgctcgatcgtgccgggccgcatcgccccgtg
ctgtacgctccggggcagtcggacgcggcgctcgaatacgtgccgggggcggtttacagc
gtcagcgcgttccgccaggagacggccgacgcgaccgtggcggccgcgctggatctgcag
gtgggtgcgccggtggcgcatgtggagcgccgggctcgggtcgacggagcccccatcatg
ctgctgcggacatggctgacatcgcggctggcggccatgctggaggcgcgcgatttcgag
gaccgcctgttcgtccaggtcttccagcgcgccaacctgaccatcgcgcgctcgcgcgag
gcgccgctggcctgcgtggcggacgcgcaccaggcgcgcgagcttgatgtggcgccgggg
gtgcccctggtgcgcgtgcgccgtatcggctacagcgtcgccgatgtgccgatttccctg
acttattgcgacttttcccccgagcgctatacgcgcgaagtggatatccgcgtattgcag
accgattga
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