Ralstonia pseudosolanacearum GMI1000: RSp0959
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Entry
RSp0959 CDS
T00071
Name
(GenBank) probable sigma-54 interacting transcription regulator protein
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rso03000
]
RSp0959
Transcription factors [BR:
rso03000
]
Prokaryotic type
Helix-turn-helix
Other families
RSp0959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
AAA_5
GAF
Mg_chelatase
AAA_2
GAF_2
AAA_16
HTH_8
AAA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CAD18110
UniProt:
Q8XRA0
LinkDB
All DBs
Position
megaplasmid:1210706..1212238
Genome browser
AA seq
510 aa
AA seq
DB search
MIDRLLLADLVADLPPAVRMQRLVGSLRSHFRCGAVALLRLEEDHLRPIAVDGLVRDALG
RRFVVGQHPRLAAILARRGVTCFHHDSTLPDPYDGLIDEQAGAPLPVHDCMGVSLHVEGQ
LWGALTLDTLKIGTFDADAQAELRQLAVVIEAAARTTRLEAEIRALRATRGDLPPGDPAA
DDWEIIGQSPAIHQLLHELEVVADSELPVLLLGETGVGKELFAHRLHRLSRRRDRPLVHV
NCAALPESLAESELFGHVKGAFSGAVGERPGRFEAADGGTLFLDEVGELPLPVQAKLLRA
LQNGEIQRLGADHPRHVDARVIAATNRNLRERVRDGAFRADLYHRLSVYPVPIPPLRERG
NDVLLLAGRFLESNRARLGLRSLRLSPGAEEALRRYPWPGNVRELEHVVSRAALKMLSRG
ASRDDIVTLETGLLDLDAQAVAPPSPAGLPPEASPDIAPGITLRDAVADCQRRHIQAALA
IHQDNWAQTARTLGLDASNLHKLARRLGLK
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgattgaccgtctgctcctggccgatttggtcgccgatctgccgccggcggtgcgcatg
cagcggctggtcggcagcctgcgctcgcatttccgctgcggagcggtggcgctgctgcga
ctggaagaagaccacctgcggccgattgccgtggatgggctggtgcgcgatgcgctgggc
cggcgcttcgtggtcgggcagcatccgcgcctggcggccatcctcgcgcggcgcggcgtg
acatgcttccaccatgacagcaccctgcccgatccgtacgacgggctgatcgacgaacag
gccggcgcgccgctgccggtgcacgactgcatgggcgtcagcctgcatgtcgaagggcaa
ctgtggggcgcgctcacgctcgacacgctcaagatcggcaccttcgacgccgatgcgcag
gccgagctgcgccagctggccgtcgtgatcgaagccgccgcgcgcaccacgcggctcgag
gccgagatccgcgcgctgcgcgcgacccgcggcgacctgccgcccggcgatcccgccgcg
gacgactgggagatcatcggccagagcccggccatccaccaattgctgcatgagctggag
gtcgtggccgactccgagttgccggtcttgctgcttggcgaaaccggcgtgggcaaggag
ctgttcgcgcaccggttgcatcgcctgtcgcgccggcgcgatcgcccgctggtgcatgtc
aactgcgcggcgctgccggaatcgctggccgaaagcgagctgttcggccacgtcaagggc
gcgttctccggcgcggtgggcgagcgcccgggccgcttcgaggccgccgacggcggcacg
ctgtttctcgacgaggtgggcgagctgcccctcccggtgcaggccaagctgctgcgcgcg
ctgcagaacggcgaaatccagcggcttggcgccgaccacccacgccatgtcgacgcgcgg
gtgatcgccgccaccaaccgcaacctgcgcgagcgcgtgcgcgacggcgcattccgggcc
gatctgtatcaccggctgtcggtctatccggtgccgattcccccactgcgcgaacgcggc
aatgacgtcctgctgctggcgggccgcttcctggaaagcaaccgtgcgcgcctgggcctg
cgcagcctgaggctcagccccggcgcggaagaagccttgcgccgctacccctggcccggg
aacgtgcgcgaactggagcacgtcgtcagccgcgccgcgctcaagatgctgagccggggc
gccagccgcgacgacatcgtgacgctggaaaccgggctgctcgacctggacgcccaggcc
gtcgccccgccctcgcccgccggactgccgccggaggcatccccggacatcgccccgggc
atcaccttgcgcgacgccgtggccgattgccagcggcggcacatccaggccgcgctggcg
atccaccaggacaactgggcacagaccgcacgcacgctcgggctggatgccagcaacctg
cacaagctggcgcgacggctggggctcaagtag
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