Ralstonia pseudosolanacearum GMI1000: RSp1167
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Entry
RSp1167 CDS
T00071
Name
(GenBank) conserved hypothetical protein
KO
K03333
cholesterol oxidase [EC:
1.1.3.6
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Pathway
rso00984
Steroid degradation
rso01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00984 Steroid degradation
RSp1167
Enzymes [BR:
rso01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.3 With oxygen as acceptor
1.1.3.6 cholesterol oxidase
RSp1167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GMC_oxred_C
GMC_oxred_N
Abhydrolase_1
DAO
Abhydrolase_6
Pyr_redox_2
FAD_oxidored
FAD_binding_2
Hydrolase_4
NAD_binding_8
Fer4_9
Pyr_redox
Fer4_2
Fer4_6
HI0933_like
GIDA
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
CAD18318
UniProt:
Q8XQQ4
LinkDB
All DBs
Position
megaplasmid:1466406..1469858
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AA seq
1150 aa
AA seq
DB search
MVRIATPLSEIKEHYDIVVIGSGYGGGIAASRMARAGRTVCLLERGREIIPGEYPNTLAE
ATEEFQVHHPDGHIGSRTGLYDLHVNAQQNVVVGCGLGGTSLINANVSLEPEPQVFEDPR
WPRHVREHADTLLKEGFARAREMLRPTPYPGTAAALPKLQANEKSASQMQAPHTFYRPPI
NVTFDDLPDNRNHVGVEQLRCNDCGDCVSGCNNKAKNTTLMNYLPDASNHGAEIFCQASV
RYLERDGDGWIVHYQYVGTGREAFDAPTLFVKANIVVLSAGTLGSTEILLRSRTQGLLLS
EKLGKHMSGNGDILGFGYNNNDKINGIGFGAHSGKGIGPVGPCITSIIDMRDEKDWTQRM
VIEEGSIPGALGRAIVPAMAAASTQIGRPTSTGVAAKIAHAAREVESAVLGPYYGAVNRL
QTYLIMSHDNGAGEMKLDDHDQLRVHWPGVGEQPNFKIGNDRLYDATRALGGTYVPNPIW
TDLFKHSLITVHPLGGCVMGEDAAQGVVNHKGQVFSSASGSDVYPGLYVTDGSVIPTSLA
VNPLLTISAVSERTMALLAQDRGWKIDYTLPSAPSKPARPVKPGIEFTEAMKGYVSLAHR
QAQGTDPAVYEAAYQAGKDAGSTMAFIVTIRSDDLDQLIANPQHPATIVGTLNAPALSAR
PLTVSHGVFNLFEAFPEQVGVRHMNYNMALTAEDGKEYFFSAFKSVPSDHSVLRAWADTS
TLYVTVYDGTDNTGPVVGSGVLHIEPADFAKQMTTMKVLNASGEAERLKDLARFGKYFAG
VLWESYGGVLAGNAYFNPDAPPRKKRPLNAGAPEVLFFQTEDNVTLRLTRFQGGSKGPVM
LVHGLGVGSNIFSTDTIATNLLEFLYQHGYDVWLLDFRVSILLEASRQQCDGDQIARYDF
PAAIDRIRQATGADDVQCVVHCYGATTFFMSLLAGLQGVRSVVCSQIATDIVVPPATAAK
TGLHIPSVLDKLGVKSLTAYTQANADWLEKLYDTALKGYALVEAQGYCNNPVCHRITFMY
ASLYRHETLNESLHDNLHELFGVANMRTMEHLALMCRTGHLVGFGGEDIYMPHLDRLQLP
ILFISGAQNECYLPESTRRTYQQLVDRFGPERYSRLVIPGYGHIDCMFGKNAAMDVYPAI
LAHLDKTASA
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atggtacgaattgcgacgccactcagtgaaatcaaggagcattacgacattgtggtgatc
gggtccggctatggcggaggcattgctgcatcgcgcatggcgcgagcgggccgcacagtc
tgtctgctggagcgcggccgcgaaatcattcccggcgaatatcccaataccctggcggag
gcgacggaagagtttcaagtccatcaccccgatggccatatcggctcacgcaccggtttg
tacgatctgcatgtcaatgcccagcaaaacgtcgtcgtgggctgtggcctgggcggcacc
tcgctgatcaacgccaacgtctcgctggagcccgagcctcaggtcttcgaagacccccgc
tggccccggcacgtgcgtgagcatgccgataccttgctcaaggaaggcttcgcccgggcg
cgggaaatgctccggcccaccccttaccccggcacggcggccgccttgcccaagctgcag
gccaacgaaaagtccgcctcgcagatgcaggctccgcacaccttctatcgcccgcccatc
aatgtcacgttcgacgacttgccggacaaccgcaaccacgtgggcgtggagcaattgcgc
tgcaacgattgcggcgactgtgtctccggctgcaacaacaaagccaagaacaccacgctg
atgaactacctgcccgatgccagcaatcacggcgcggagattttctgccaggcatcggtc
cgctatctggagcgcgatggcgatggctggatcgtgcactaccagtatgtcggcaccggg
cgggaggcattcgatgcgccaacgctgttcgttaaagccaacatcgtcgtactctccgcc
ggcacgttgggctcgacggagatcctgctgcgttcgcgcacccagggcttgctgctctcc
gagaagctgggcaagcacatgagcggcaacggcgacatcctgggcttcggttacaacaac
aacgacaagatcaacggcatcgggttcggcgcgcactccggcaaaggcatcggcccggtg
gggccctgcatcacctccatcatcgacatgcgcgatgagaaggactggacgcagcgcatg
gtgatcgaagaggggtcgatcccgggagccctcggccgcgccatcgtgcccgccatggcc
gccgcatcgacgcagatcggacggccgacctctaccggggtggccgccaagatagcgcac
gccgccagagaggtggagagcgcggtactggggccctactacggggcggtcaatcgcctg
caaacctatctgatcatgagccacgacaatggcgcgggcgagatgaagctggacgaccac
gaccaactgcgcgtccactggcccggcgtgggagaacagcccaacttcaagatcggcaac
gaccgactgtatgacgccacgcgcgcactgggcggcacctatgttcccaatcccatctgg
accgacctgttcaagcacagcctgatcaccgtccacccgctgggcgggtgcgtgatgggc
gaggacgcggcacagggcgtcgtcaaccacaaggggcaagtgttcagcagcgcgtcaggc
agcgatgtctacccggggctgtacgtgaccgatggctcggtcatccccacttcactggcg
gtcaacccattgctgaccatttcggctgtcagcgagcgaacgatggccttgctggcgcaa
gaccggggctggaagatcgactacaccttgccgtcggcgcccagcaagcccgcccggccc
gtcaagccgggcatcgaattcaccgaagccatgaaagggtatgtctccctggcccatcga
caggcgcaaggcaccgatcccgccgtctacgaggcggcctaccaggccggcaaggacgct
gggtccaccatggcgtttatcgtgacgatcaggtccgacgacctggaccaattgatcgcc
aatccccagcatccggccacgatcgtcggcacactgaatgcccccgctttgtctgcgcgg
ccgctgacggtgagccatggcgtgttcaatctgtttgaggcatttccggaacaggttggc
gtgcggcacatgaactacaacatggcgctaaccgccgaagacggcaaggaatacttcttc
agcgccttcaagtcggtgcccagcgaccacagcgtgttgcgagcgtgggccgacaccagc
acgctctatgtcacggtctacgacggcacggacaacaccggaccggtcgtcggatcgggc
gtcctgcatatcgaaccggccgacttcgccaagcagatgaccacgatgaaggtcctcaac
gcctccggcgaggctgagcgcctgaaagatctggcccgtttcggcaagtattttgccggg
gtgctatgggagagctacggcggggtactggccgggaacgcctacttcaacccggatgcc
cctccgcgcaaaaagcgcccgctcaacgccggcgcgccggaagtgctgttcttccagacc
gaggacaacgtgacgctgcgcctgacccgctttcagggcggcagcaaggggccggtgatg
ctggtgcacggcctgggcgtggggtcgaacattttctcgaccgacaccatcgccaccaat
ctgctggagttcctctaccagcacggctacgacgtctggttgctcgatttccgcgtcagc
atcttgctggaggccagccggcagcaatgcgatggcgaccagatcgcgcggtacgacttc
ccggctgccatcgaccggattcgccaagccaccggagccgacgacgtgcaatgcgtggtg
cattgctatggcgccaccacgtttttcatgtccctgctggccggtctgcagggtgtgcgc
tccgtcgtgtgctcgcagattgccaccgacatcgtcgtgcccccggcaaccgccgccaag
accgggctgcacatcccatcggtgctggacaagctcggcgtgaagtccctcaccgcctat
acccaggccaacgccgactggctcgaaaaactctatgacacggcgcttaaaggctatgcg
ctggtcgaagcacaaggctattgcaacaacccggtctgccaccgcatcaccttcatgtat
gcctcgctgtaccgccacgaaacgctcaacgaatccctgcacgacaacctgcatgagctg
ttcggcgtggccaacatgcggaccatggagcatcttgccctgatgtgccggacgggccat
ctggtgggcttcggcggagaagacatctacatgccgcacctggacaggctccagttgccg
atcctgttcatcagcggagcgcagaacgaatgctatctgcctgaaagcacccggcgcacg
tatcagcaactggtggatcgctttggcccggaacggtacagccggctggtcataccggga
tacggccatatcgactgcatgtttggcaagaatgccgccatggatgtctatccggccatc
ctggcccacctggacaaaaccgcctcggcctga
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