Ralstonia pseudosolanacearum GMI1000: RSp1279
Help
Entry
RSp1279 CDS
T00071
Symbol
fumC
Name
(GenBank) probable fumarate hydratase class II (fumarase c) protein
KO
K01679
fumarate hydratase, class II [EC:
4.2.1.2
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Pathway
rso00020
Citrate cycle (TCA cycle)
rso00620
Pyruvate metabolism
rso00720
Other carbon fixation pathways
rso01100
Metabolic pathways
rso01110
Biosynthesis of secondary metabolites
rso01120
Microbial metabolism in diverse environments
rso01200
Carbon metabolism
Module
rso_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rso_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rso_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RSp1279 (fumC)
00620 Pyruvate metabolism
RSp1279 (fumC)
09102 Energy metabolism
00720 Other carbon fixation pathways
RSp1279 (fumC)
Enzymes [BR:
rso01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
RSp1279 (fumC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lyase_1
FumaraseC_C
Motif
Other DBs
NCBI-ProteinID:
CAD18430
UniProt:
Q8XQE8
LinkDB
All DBs
Position
megaplasmid:1619425..1620810
Genome browser
AA seq
461 aa
AA seq
DB search
MTTRTERDTFGPIEVPADRLWGAQTQRSLQNFDIAGDRMPRELIDALARIKRASAAVNQR
LGLLPADKANAVIAAADEVIAGKHPGEFPLVVWQTGSGTQSNMNMNEVLANRASELLGGE
RGEARLVHPNDDVNRSQSSNDVFPTAMHVAAVTAITRHLLPSLRALRETLARKAIDFDDI
IKIGRTHLQDATPLTLGQEFSGYAAQLQHSETHLNAALPHLCELALGGTAVGTGLNAPAG
YAEQVAAELAALTGLPFVTSPNKFETMASADGLVHAHGALKTLAASLTKIANDIRWLASG
PRSGLGELSIPENEPGSSIMPGKVNPTQSEAMTMLCAQVFGNDVAVNIGGASGNFELNVF
RPMIAYNFLHSARLLADGMRSFNDHCAVGIEPNRERIAELVQRSLMLVTALNPHIGYDKS
AQIAKKAHKEGTSLREAALALGYVTAEQFDAWVRPEQMVGR
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgacgacccgtaccgaacgcgatacctttggcccgatcgaagtccccgccgaccgcctg
tggggcgcgcagacgcagcgctcgctgcagaacttcgacatcgccggcgaccgcatgccg
cgcgagctgatcgacgcgctggcccgcatcaagcgcgccagcgccgccgtcaaccagcgc
ctgggcctgctgccggccgacaaggcgaacgcggtcatcgccgcggccgacgaggtcatc
gccggcaagcatccgggcgagttcccgctggtggtctggcagaccggctccggcacgcag
agcaacatgaacatgaacgaggtgctcgccaaccgcgccagcgaactgctgggcggcgag
cgcggcgaagcccgcctggtgcaccccaacgacgacgtgaaccgcagccagtcgtccaac
gacgtgttcccgacggcgatgcacgtggcggccgtcaccgccatcacgcggcacctgctg
ccgtcgctgcgcgcgctgcgcgagacgctggcgcgcaaggccatcgacttcgacgacatc
atcaagatcggccgcacccacctgcaggacgccacgccgctcacgctcggccaggagttc
tccggctacgcggcccagctgcagcacagcgagacgcacctgaacgccgcgctgccgcac
ctgtgcgagctggcgctgggcggcacggcggtcggcaccggcctgaatgcgccggccggc
tatgccgaacaggtggccgccgaactcgccgcgctgaccggcctgcccttcgtcacctcg
cccaacaagttcgagaccatggcctcggccgacggcctggtgcacgcgcacggcgccctg
aagacgctggccgccagcctgaccaagatcgccaacgacatccgctggctggccagcggc
ccgcgcagcggcctgggcgagctgtccattcccgagaacgagccgggctcgtccatcatg
ccgggcaaggtcaacccgacccagagcgaggcgatgacgatgctgtgcgcgcaggtgttc
ggcaacgatgtcgccgtcaacatcggcggggcctcgggcaacttcgagctgaacgtgttc
cggccgatgatcgcctacaacttcctgcacagcgcgcgcctgctggccgacggcatgcgc
agcttcaacgaccactgcgcggtcggcatcgagcccaaccgcgagcgcatcgccgagctg
gtgcagcgctcgctgatgctggtgaccgcgctcaacccgcacatcggctacgacaaatcg
gcgcagatcgccaagaaggcgcacaaggaaggcaccagcctgcgcgaggcggcgctggcg
ctggggtatgtgacggccgagcagttcgatgcgtgggtgcggccggagcagatggtggga
cgctga
DBGET
integrated database retrieval system
