Ralstonia pseudosolanacearum GMI1000: RSp1616
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Entry
RSp1616 CDS
T00071
Name
(GenBank) probable transcription regulator transcription regulator protein
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rso03000
]
RSp1616
Transcription factors [BR:
rso03000
]
Prokaryotic type
Helix-turn-helix
LacI family
RSp1616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_Crp_2
HTH_26
HTH_31
HTH_IclR
Crp
HTH_3
HTH_AsnC-type
MarR_2
DRTGG
MarR
HTH_24
Motif
Other DBs
NCBI-ProteinID:
CAD18767
UniProt:
Q8XPM2
LinkDB
All DBs
Position
megaplasmid:2033437..2034489
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AA seq
350 aa
AA seq
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MTKSSNASVAETAPAPARRARKSTGRITLSDLARLVGVTKVTVSRALNTPELVSADTLGR
VREAVRQTGYTPDLVAGSLASNRSRLIVALIPTIAGSVFQETIAALTTELAAAGYQLLIG
QSGYDESREDALLDAIVGRRPAGIVLTGVAHSASVRQKLQAAGVPVVETWDITRTPLDML
VGFSHQKVGQAAARYLKQRGAQRPAVITPNDRRAQARAQAFVKAFGNSAGIPVIAAESPA
GLGDGRRALGELLDRHPDIDAVFCGADILALGVLMEAGHRGLAVPAQLRVVGYGDQAFAR
DTTPALTTIRIDGTGIGKLAASLLIERIEHGDAARRTVDVGFTLVERDSA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaaatcctccaacgcgtctgtcgcagaaaccgcgcccgcccccgcgcgccgcgcg
cgcaaaagcaccgggcgcatcacattgagcgatctcgccaggctggtcggcgtgaccaag
gtcacggtatcgcgggcgctgaacacgccggagctggtttcggccgacacgctcgggcgc
gtgcgcgaagccgtgcgccagaccggctacacgcccgacctggtggccggctccctggca
tcgaaccgcagccggctgatcgtcgcgctgatccccaccatcgcgggcagcgtgttccag
gagaccatcgccgcgctgaccaccgagctggcggcggcaggctatcagttgctgatcggg
cagagcggctatgacgaatcgcgcgaagacgcgctgctcgacgccatcgtcggacggcgc
cccgcgggcatcgtgctcaccggcgtcgcgcactcggccagcgtgcggcagaagctgcag
gccgccggcgttccggtggtggagacgtgggacatcacgcgcacgccgctcgacatgctg
gtcggcttctcgcaccagaaggtcgggcaggcggcggcccgctatctgaagcagcgcggc
gcgcaacgccccgccgtcatcacgccgaacgaccgccgcgcgcaggcgcgcgcgcaggcc
ttcgtgaaggcgttcgggaacagcgccggcatccccgtgatcgccgcggaatcgcccgcc
gggctgggcgacggccggcgcgcgctgggcgagctgctcgatcggcatcccgacatcgac
gccgtgttctgcggcgccgacatcctcgcgctgggcgtgctgatggaagccggccaccgg
ggccttgccgtgccggcacagctgcgcgtggtgggctacggcgaccaggcattcgcccgc
gacaccacgcccgccctcaccaccatccgcatcgacggcacgggcatcggcaagctggcg
gcctcgctgctgatcgagcgcatcgagcacggcgacgcggcgcgccgcacggtcgacgtc
ggcttcacgctggtggagcgggacagcgcctga
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