KEGG   Rhizobium sophoriradicis: N2597_08680
Entry
N2597_08680       CDS       T11817                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
rsop  Rhizobium sophoriradicis
Pathway
rsop02020  Two-component system
Brite
KEGG Orthology (KO) [BR:rsop00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    N2597_08680
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:rsop02022]
    N2597_08680
Two-component system [BR:rsop02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   N2597_08680
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 HTH_8 Mg_chelatase AAA_5 AAA_2 AAA MCM FleQ AAA_16 P-loop_TraG nSTAND3 ABC_tran
Other DBs
NCBI-ProteinID: UWU36346
LinkDB
Position
1711458..1712822
AA seq 454 aa
MASDILVVDDEHDIREIVSGILSDEGHETRTAHDSDSALAAISDRVPRLIFLDIWMQGSK
LDGLSLLDEIKTRHPDLPVVMISGHGNIETAVSAIKRGAFDFIEKPFKADRLILIAERAL
ENSKLKREVSELKRRTGDALELIGTSVAVSQLRQTIEKVSPTNSRIMILGASGSGKELVA
RMIHKKSARANGPFVAINAANITPDRMEVALFGTEGTPGQARKIGALEEAHRGILYLDEV
GEMPRETQNKILRVLVDQQFERVGGSKRVKVDVRIISSTAYNLESRIAEGWFREDLYHRL
AVVPVRVPALAERREDIPFLVDQLMRQISEQAGIRPRRIGDDAMAVLQAHDWPGNIRQLR
NNIERLMILARTDGPDAPITADMLPTDLGDMLPKVSAKNDYHIMTLPLREAREMFEKDYL
IAQINRFGGNISRTAEFVGMERSALHRKLKSLGV
NT seq 1365 nt   +upstreamnt  +downstreamnt
atggcctctgatattctcgtcgtcgatgacgagcacgatattcgcgagatcgtttccggc
attctctccgacgagggacacgagacacgcaccgcccatgacagcgacagcgcgctggcg
gcgatttccgaccgcgtgccgcggctgatcttcctcgatatctggatgcagggcagcaag
cttgacggcctgtcgctgctcgacgagatcaagacccgccatcccgatctgcccgtcgtg
atgatctcgggccacggcaacatcgagaccgccgtctcggcgatcaaacgcggcgccttc
gatttcatcgaaaagccgttcaaggccgaccggctgatactgatcgctgaacgggcgctc
gaaaattctaaactcaagcgcgaggtttccgagctgaagcggcgaaccggcgatgccttg
gagttgatcggcacctcggtcgccgtctcgcagctgcgtcagacgatcgagaaggtttcg
ccgaccaacagccgcatcatgatcctcggcgcctcaggctccggcaaggagctggtggcg
cggatgatccacaagaagtcggcccgcgccaacggccccttcgtggcgatcaatgccgcc
aacatcacgcccgatcgtatggaagtggcgctgttcggaaccgagggcacgcccggccag
gcgcgcaagatcggcgcgctcgaggaagcccatcgcggcatcctctatctcgacgaggtc
ggcgagatgccgcgcgagacgcagaacaagatcctgcgcgtgctggtcgatcagcagttc
gagcgggtcggcggttccaagcgcgtcaaggtcgatgtccgcatcatctcctcgaccgcc
tataatctcgagagccgcatcgccgaaggctggttccgcgaggatctctatcatcgcctc
gccgtcgtgccggtgcgcgtacccgcccttgccgagcggcgcgaggacattcccttcctc
gtcgaccagctgatgcggcagatttccgaacaggctggcattcgtccgcgccgcatcgga
gacgacgccatggcggtgctgcaagcgcatgactggccgggcaatatccgccagctgcgc
aacaatatcgagcggctgatgattcttgcccgcaccgacgggccggatgcgccgatcacc
gccgacatgctgccgacagatctcggcgacatgctgccgaaggtgtcggccaagaatgac
tatcacatcatgacgctgccgctgcgcgaagcccgagagatgttcgagaaggattatctg
atcgcccagatcaaccgcttcggcggcaacatctcacgcaccgccgaattcgtcggcatg
gagcgttcggcgctgcaccgcaagctgaaatcgctcggcgtctaa

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