KEGG   Rhizobium sophoriradicis: N2597_14025
Entry
N2597_14025       CDS       T11817                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
rsop  Rhizobium sophoriradicis
Pathway
rsop02020  Two-component system
Brite
KEGG Orthology (KO) [BR:rsop00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    N2597_14025
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:rsop02022]
    N2597_14025
Two-component system [BR:rsop02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   N2597_14025
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 AAA_5 HTH_8 AAA_2 Mg_chelatase T2SSE Zeta_toxin AAA AAA_16 HTH_30
Other DBs
NCBI-ProteinID: UWU33277
LinkDB
Position
2819330..2820676
AA seq 448 aa
MDMAIPVALIDDDGDLRRATAQTLELAGFFVSAYDGAKAALADLPADFAGPVVTDIRMPE
IDGLQLFATLKDLDADLPVILMTGHGDIPMAVQAIQDGAYDFIAKPFPANRLVQSVRRAS
EKRRLVLENRMLRKAADDAQETLPLIGQTPVMDNLRKILRHIADTDVDVLVAGETGSGKE
VVAQILHQWSHRRKGNFVALNCGALPETVIESELFGHEAGAFTGAQKRRTGRIEHASGGT
LFLDEIESMPVATQVKMLRVLEMREITPLGTNEVRPVDLRVVAAAKIDLGDPEVRGDFRE
DLYYRLNVVTISIPPLRERREDIPLLFSHFAARAAERFRRDVPELSENVRHHLATHVWPG
NVRELSHYAERVVLGVEGGAAAPLPPQPAGGTLPERLERYEAEIIRDALASNDGDVRRTI
EALGIPRKTFYDKLQRHGINRGGYASRK
NT seq 1347 nt   +upstreamnt  +downstreamnt
atggacatggccatacccgttgctttgatcgacgatgacggcgatctgcgccgcgccacg
gcccagacgctggagctcgccggcttcttcgtttccgcctatgacggtgccaaagcagcg
ctggccgacctgccggccgacttcgccggccccgtcgtcaccgatatccgcatgcccgag
atcgacgggctgcagctgttcgccacgctcaaagacctggatgccgacctgcccgtcatc
ctgatgactggccacggcgatatcccgatggccgtccaggccatccaggacggcgcctat
gatttcatcgccaaacccttcccggccaaccggctcgtccagagcgtgcgccgcgccagc
gaaaaacgtcggctcgttctggaaaaccgcatgctgcgcaaggctgccgacgacgcgcag
gagactttgccgctgatcggccagacgcccgtcatggacaatctcaggaagatccttcgc
cacatcgccgataccgatgtcgacgtgctggtcgccggcgaaaccggcagcggcaaggaa
gtggtcgcccagatcctgcatcagtggagccatcgccggaagggcaatttcgtggcgctg
aactgcggggcgctgcccgaaaccgtcatcgaaagcgagctgttcggtcacgaggccggc
gcctttaccggcgcccagaagcgccgcaccggccgcatcgaacatgcaagcggcggcacg
cttttcctcgacgagatcgagagcatgcctgtcgccacgcaggtcaagatgctgagggtg
ctggagatgcgcgaaatcaccccgctcggcaccaacgaggtgcgcccggtcgacctgcgc
gtcgtcgcggccgccaagatcgatctcggagatcccgaggtgcggggcgattttcgcgag
gacctctattacaggctgaatgtcgtgacgatctccattccgccgctcagagagcgccgt
gaggatattccgctgctgttctcccatttcgccgcgcgcgccgccgagcgcttccgccgc
gacgtgccggaactttcagagaatgtccgccatcatcttgccacccatgtatggccgggc
aatgtccgcgagctctcccattatgccgaacgcgtggtgctgggcgtcgaaggcggcgca
gcagcgccccttcccccgcagccggcgggcggcacgctgcccgagcggctggaacgctac
gaggccgagatcatccgcgatgcgctcgcgagcaatgacggcgacgtgcgccgcaccatc
gaggcgctcggcatcccgagaaagacgttttacgacaagctccagcggcacggcatcaac
cgcggcggctatgcctcgcgtaaataa

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