KEGG   Rhizobium sophoriradicis: N2597_16365
Entry
N2597_16365       CDS       T11817                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
rsop  Rhizobium sophoriradicis
Pathway
rsop02020  Two-component system
Brite
KEGG Orthology (KO) [BR:rsop00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    N2597_16365
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:rsop02022]
    N2597_16365
Two-component system [BR:rsop02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   N2597_16365
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 HTH_8 HTH_50 AAA_5 FleQ AAA_2 AAA_16 TadZ_N Tnp_IS2_N AAA_3 PDE8A_N
Other DBs
NCBI-ProteinID: UWU33703
LinkDB
Position
complement(3314369..3315703)
AA seq 444 aa
MNEAKILLVDDEEELRRSTAQALELSGFSVETFSNGDHVLELIGYSFPGVVVSDIRMPGI
DGMTLMQKIREIDQEVPVILVTGHGDVQLAVKAMREGAYDFIEKPFTPEMLAGVIRRAME
RRGLVLENRLLKAVAGKRDDIEARLPGRTQVMVDLRYRIRAIGASDADTLIVGETGAGKE
VVARALHDISARASRPFIAINCAALPANLIESELFGHEPGAFPGAVRPRYGKFEHGRGGT
ILLDEIGSMPFDLQAKFLRVLQERVISRLGSNEIVPLDVRFIATSKVDLEAEVAAGRFRA
DLFYRLNVATLHVPSLSQRRPDVPLLFLQLVREAAARYGRDELLVPPEVISDIAQRDWPG
NVRELRNAADRLVLGLDNGGWQAEEAMGLAERVAEFERGVIASALVAHGGSLRPVYESLG
ISRKTLYEKMQKYGLDKRMLITDG
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgaacgaagcgaagatcctgcttgtcgacgacgaagaagagttgcgccggtcgactgcg
caggcgctggagctttccggcttcagcgtcgagaccttttcgaacggcgatcatgtgctg
gagctgatcggctacagctttcccggcgtcgtcgtcagcgatatccgcatgcccggtatc
gacggcatgacgctgatgcagaaaatccgcgagatcgatcaggaagtgccagttatcctc
gtcaccggccacggcgacgtccagcttgcggtgaaggcgatgcgcgaaggcgcctatgat
ttcatcgagaagccgttcacgcctgaaatgctcgcaggggtcattcggcgagcaatggag
cggcgtggcctcgtgctcgaaaaccggctgctgaaggcggtcgcgggcaaacgcgacgat
atcgaggcgcggctgccggggcgtacacaggtgatggtggatctgcgctaccgcatccgg
gcgatcggggcgagcgatgccgatacgcttattgtcggcgagaccggcgccggcaaggag
gtggtggcccgcgcgcttcacgacatcagtgcccgggcaagccggccgttcatcgctatc
aattgcgccgcgctgccggcgaatctcatcgagagcgagcttttcggtcatgagccaggc
gcctttccgggagcggtcaggccgcgttacggaaaattcgagcacgggcgcggcggcacc
atcctgctcgacgagatcggctccatgccgtttgacctgcaggcgaagttcctgagggtg
ctgcaggagcgggtgatttccaggctcgggtcgaacgagatcgtgccgctcgacgtccgc
ttcattgcgacgagcaaggtggatctcgaggcggaggtggcagccggccgcttccgtgcc
gatctcttctaccggctgaatgttgcgacgctgcacgtgccgtcgctgtctcaacgacgg
ccggacgttccgctgcttttcctgcaactagtgcgagaggcggccgcccgctacggccgc
gacgaactcctcgtgccgccggaggtgatctccgacattgcccagcgtgactggcccggc
aatgtccgcgaattgaggaatgccgccgatcgtttggtcctcggtctcgacaatggcggg
tggcaggccgaagaggcgatggggcttgcggagcgagtcgccgaattcgagcgaggcgtc
attgccagcgcgctggtcgcgcatggcggcagccttcggccggtttatgaatcgctcggc
atttcccgcaagacgctctacgaaaagatgcagaaatacggcctcgacaagcggatgctg
attaccgacggctga

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