Rhizobium sophoriradicis: N2597_18730
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Entry
N2597_18730 CDS
T11817
Name
(GenBank) translocation/assembly module TamB domain-containing protein
Organism
rsop Rhizobium sophoriradicis
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Ortholog
Paralog
GFIT
Motif
Pfam:
TamB
TamB_N
Motif
Other DBs
NCBI-ProteinID:
UWU36928
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All DBs
Position
3817375..3823797
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AA seq
2140 aa
AA seq
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MQTLAKIVNWIIRLTGYAVGATLILAVAALAIFGFTSFGARIVTEKIASTLSNRDMTIEV
REPEGLLTGGLRAAEISISDTRGVFAEIHGVAIDWNPLALLTGTFHAKRFEIEAIDVLRK
PVRTLPSRPDAENSGGFSLPIKIDVDQVALPNIKLAEAFAGRAFALAAEGSLSAAGDGGE
AIVKVSRHAVPDARLTADIAYAPAENRLLLKAQLAEPKGGLLAGFLGLPDSPAVNIDLDG
QGPISDWKGKLQAALDGQQRAAIEGRHAITADGLHHLDLKGGGDLSSLLPAAFRPLFAGQ
TNIDLAATFNDHGKIDIQTGNVATGSVVIAASGTLDPAGNNSLNANLLGPSGPVDFRWPL
AEGEARFLISGLNLALTGDSQAARLSVSGSLDSATLPQADIGNVKLTAKSDAFNLAARSG
SVQLRLVAGDATFAEPNLNRAVKGPITIAAPLQIAAGSIGFNGTTVESANINGSLNGSYR
LTDRALTGNVKLIIAPAALPAAATSRFDGPISLESQVAGTVPSKFALSNLVVNSGTLEAA
GNVALDGSTLNADLSGRLPDIGKLMPGASGGAGYAVRIGGELPAIAVTANLKATSLQMAD
RTLANLNVDLSGVADPKAPQGKIAATGTIDGQPIDVNGDIRSENGRMSIPALTADIGGNR
LTGNLEFSPSLTPSGALTFDFPNIGLLAALGGQKAEGDLKGSLDIAGDDGKVAVKLQATG
ASLRRDTLAVVKPEIDVTVSDLGALAANGTVGAEEVNAGANSLAGLSLAFTKQQNQTDFD
LNAAYDGNPVLATGNIQTADGTIDVNLDRFSASPRNIPLELDAAAQVKIAGGAASLNGLT
LKTGTGSVSVTGSAGQTLKLDAVIKELPAALANGFVPNLSAGGTISGTIAVTGTPAAPIA
DFKLDWKDATTGQTKGAGLAPLGITAGGKFADRKLDFDTTIGSADGLSLKAAGNVGLADP
AAPVLDIDANILNLPAGVANGFVPDLAAEGTITGRVNAAGSLKAPTTNFDLAWKSAATSH
TKRAGLTALDVTASGKFADNTLDFDAAVSGADSLSLKANGNVEVTGTTIGSAQIDATLAN
IPAAVANGFVPDLAAAGLVSGTVSASGSLAAPTADFDLHWQNAVTSHTKRAGLAGLGVTA
SGKFADNKLGFDAAASGADGLSLKANGDVAITGKTVGAAKVDATLANIPASIANSFVADL
AAEGSVSGKISAAGSPSAPTANFDLNWKEAATSHTRRAGLAALGITTSGKFAENKLDFNA
AALGDQGLSLKAVGNVALAGTAIDSVKLDAEIAKLPAALANAFVPGLAAGGTISGTMSAA
GTPAAPKADFKLDWTDAATSHTRTAQLSGLALAASGHLADNKLDFNANLGGKDGLSLKAA
GNVAISGASVSNLDVKADLADLPASLANGFVPGLAAEGTVSGTASASGALPKPAVDFKLD
WKNAAIAQTRSSGLSGLSAAASGKFANDRVDFDANLAGKDGVLAKATGGVTIAGTAIRDL
SVNADIPALPANIANAFVPGLGAEGTLSASAVTSGTPADPIVDFKLDWKDAATSHTKAAG
LSRLALAATGKYAGDRLDFDADLRGSGGINLKAAGNLSIAGTSIRSIDVTANAANVPAAI
ANGFVPGIGADGTISASAKATGTLSSPAVDFKVDWKNAATSQTKGAGLSPLSIGASGKLA
GSKLTVETSLAGDAGMSLKGGGSVVISGNRALDLRFNGNVPFAVLSTPLAQQGLVADGVA
TVNLSIGGTAAAPVINGTVSTNGAKLVDVRRNLAVNNLAATVTFNGTQAVISRLSGNLGG
GGTISASGTIGIQPAGGFPADISIKLDKAVYVDGTLVVSTVNGTVGLRGPIMSATLSGKL
RLDKTSITVPEKLPTSLSEIDIRHKNAPRAVLAQLRDGGGRKTGEKSSVITLDLEIDAPS
QIFVRGRGIDAELGGRVTIRGTAAAPIVTGGFTMRRGRLTILNRRLNFSDKSRITFAGDL
TPALDMEATSTSGTTTLTVDVAGLATDPSITFSSSPQLPQDEVLAQLIFGQSMSKLSPVQ
IAQLADAVSQLAGNRSTSLFEGLRNQLGVDDFDVSTDEKGQTSVSVGRYLNDRTYFELQQ
GGAAGAKAIINLDVGRGVKLRGAAGGNGAGEAGIVYEREY
NT seq
6423 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacgctggcaaaaatcgtcaactggatcatacggctcaccggctatgccgtgggc
gccacattgattctcgccgtcgcagcgcttgcgatcttcggcttcacctcttttggcgcc
cgtatcgtcaccgaaaaaatagcctccacgctttccaatcgcgacatgacgatcgaggtg
cgcgaaccggaaggtctgttgaccggcgggcttcgcgccgccgagatctccatctccgac
acgaggggcgtttttgctgagatccacggcgtggccattgactggaatccgctggcgctg
ctgacgggaaccttccacgccaagcgcttcgagatcgaagcgatcgacgtactgcgcaag
ccggtgcgcaccctgccctcccggcccgatgccgaaaattccggcggcttctctctcccg
atcaagatcgacgtcgaccaggttgcgctgcccaatatcaaacttgccgaagcctttgcc
gggcgcgcctttgccctcgccgccgaaggcagcctctcggcagctggcgacggcggcgaa
gcgatcgtcaaagtcagccgccacgcggtcccggatgcgcggcttaccgccgatatcgcc
tatgcgccggccgaaaaccggctgctgctgaaggcacagcttgccgagccgaagggcggg
ctgctcgcaggcttcctcggcctgccggacagtcccgccgtcaacatcgacctcgacggc
cagggaccgatatccgactggaaaggcaaactgcaggcggcgctcgacggacaacagcgg
gccgcaatcgaaggccggcatgcgatcaccgccgacgggctgcaccatctcgacctcaag
ggcgggggtgacctgagttcgcttctgccggcagcattccggccgcttttcgccggccag
accaacatcgatcttgccgccaccttcaacgatcatggcaagatcgacatccagacgggc
aatgtcgccaccggcagcgtcgtcattgccgcatccggcacgcttgatccggccggcaac
aatagcctcaacgccaacctgctcggcccgtccgggcctgtcgatttccgctggccgctc
gccgaaggcgaagcgcgcttcctgatatccggtctcaacctggcgctgaccggcgactcg
caagccgcccggctgagcgtcagcggctcgctcgacagcgcgaccctcccgcaggccgat
atcggcaacgtcaagctgacggcaaagagcgacgccttcaatcttgccgcccgctctggc
agcgtccagctgcgcctcgtcgccggagacgcgacttttgccgagccgaacctcaaccgt
gcggtcaaaggccctattaccatcgccgcgccgctgcagatcgcggccggcagcattggt
ttcaatggcaccaccgtcgaaagcgccaatatcaacggcagcctcaacggctcctaccgg
ctgacagaccgcgctctgaccggcaatgtcaagctgatcatcgcgccggcggctctgccg
gctgcggcgacaagcaggttcgacggtcctatttctctcgaaagccaggtggcgggcacc
gtcccgtcgaaattcgcgctgtccaacctcgtcgtcaattccggaacgctcgaagctgct
ggcaacgtcgccctcgacggctcgactttgaacgccgatctctcgggccggctgcccgat
atcggcaagctgatgccgggtgcaagcggcggagcaggctacgcagtgcgaatcggcggc
gaactgccggcaattgcggtgacggccaatctcaaggccaccagccttcaaatggccgac
cgcacgctcgccaatcttaatgtcgacctgtcgggtgtcgccgatccgaaggcgccacaa
ggcaagattgccgccaccggcacgatcgacggccagccgatcgacgtcaacggcgatatc
cgctcggagaacggcaggatgagcattccggcactgaccgccgacatcggcggcaaccgg
ctgaccggcaatctcgaattttcaccctccctgacgccctcgggcgcattgactttcgat
tttcccaatattggcctgttggctgcgctcggcggacagaaagccgaaggcgatctcaag
ggatcgctcgacatcgccggcgatgatggcaaggtcgccgtgaagctgcaggcgaccggc
gcttcgcttcgccgcgatacactcgccgtcgtcaaacccgagatcgacgtcacggtcagc
gatctcggcgcccttgcggcaaacggcacggtcggggctgaggaggtgaatgccggcgca
aacagtcttgccggcctttcgctggctttcaccaagcagcagaatcaaaccgacttcgat
ctcaatgccgcctatgatggcaatccggtgctggcgaccggcaatatccagacggcggac
ggcacgatcgacgtaaacctcgatcgtttctcggcaagtccgcgcaacatcccgctcgag
cttgacgcagcggcgcaggtcaaaatcgccggcggcgccgccagtctgaacggactgacg
ctgaaaacgggcaccggctccgtgagcgtcaccggttcggccgggcagacgctgaagctc
gatgccgtcatcaaggagctgccggcagcactcgccaacggtttcgtgcccaacctttcg
gctggcggcacgatctccggaacgatcgccgtgacgggaacgccggccgcacccatcgcc
gacttcaagcttgactggaaggatgcgacgacgggccagaccaagggggccggcttggcg
ccgctcggcatcaccgccggcggcaaatttgccgacaggaagctcgatttcgacacgacg
atcggcagcgccgacggcctctcgctcaaggcggccggcaatgtcggcctcgccgatccg
gcggcgccggtgctcgatatcgacgccaatatcctcaacttgcccgccggtgtcgccaat
ggttttgttcccgatctcgccgccgaaggcacgattacgggaagggtgaacgccgccggc
tccctcaaggctccgaccacaaatttcgatctcgcgtggaagagcgctgcgacgagccac
accaaacgcgccggtcttacggctcttgatgtgaccgcgtccggcaaattcgccgacaac
acgctcgattttgatgccgcggtcagcggcgccgacagcttatcgctgaaggcaaacggc
aacgtcgaggtcaccgggacgacaatcggcagcgcccagatcgacgcgacactggccaat
atccctgcagctgttgcaaacggtttcgtccccgatctcgcagccgctggccttgtctcc
ggaacggtctcggcgagcggatcccttgctgccccgaccgccgatttcgatctccattgg
caaaatgccgtcaccagccacaccaaacgcgccggcctcgccggtctcggcgtgacggca
tctggaaaattcgccgacaacaagctcggtttcgacgctgcggccagcggcgccgacggc
ctctcgctcaaggcaaacggcgatgtcgccattaccggtaagacggtcggcgccgccaag
gtggatgcgaccttggcaaatatcccggcaagtatcgcaaacagcttcgtcgccgatctt
gctgccgaaggctcggtctcgggaaaaatctcggcggcaggctcgccttccgcgccgacc
gccaattttgatctcaactggaaagaggctgcaacgagccacaccaggcgtgccgggctt
gccgctctcggcattaccacatcgggaaaatttgccgagaacaagcttgatttcaacgca
gcagcccttggcgatcagggcctctcgctgaaggccgtgggcaatgtcgccctcgccggc
acggcgatcgacagcgtgaagctcgatgccgagatcgccaaacttcccgccgctctcgcc
aatgccttcgttccagggctggcggccggcggcacgatatccggcaccatgtctgcggcc
ggcacacccgccgcaccgaaggccgatttcaagctcgactggacggatgccgcaaccagc
cacaccaggaccgcccaactttccggtcttgcgcttgccgcctcgggccacctcgccgac
aataagcttgatttcaacgccaatctcggcggcaaggacggcctctcgctgaaagctgca
ggcaacgtcgcgatatcgggcgcctcagtcagcaaccttgacgtcaaggccgatctcgcc
gatctgccggcgagccttgccaacggcttcgttcccggccttgcggcggagggcacggtg
tcgggaacggcatccgcctcaggcgcgcttcccaagcccgccgtcgacttcaagctcgac
tggaagaacgccgcaatcgcccagaccaggagcagcggtctttccggtctcagcgccgcg
gcatccggcaaattcgccaatgacagggtcgatttcgatgccaacctcgccggcaaggac
ggcgtgctggctaaggcgaccggcggcgtcacgattgccggaacggccatccgcgacctt
tcggtcaatgccgatattcccgccctgccggcaaatatcgccaatgcctttgttcccggt
ctcggtgctgaaggcacgctttcggcaagcgccgtcacatcgggaacgccggctgatccg
atcgtcgatttcaagcttgactggaaggatgccgcgaccagccacaccaaggctgccggc
ctctcccgtcttgcgctggcggccacaggaaaatatgccggcgacaggctcgattttgat
gctgacctccgcggcagcggcggcattaacctgaaagccgccggcaatctttccattgca
ggcacatcgatccgatcgatcgacgtcacggcaaacgctgccaatgttccggctgccatc
gccaacggctttgttcctggtatcggcgccgacggcacgatctcggcgagcgccaaggcg
accggcacgctgtcctcccccgctgtcgatttcaaggtcgattggaagaacgccgcgacg
agccagaccaagggcgccggtctttcgccgctcagcatcggggcctccggaaagctggcc
ggcagcaagctgaccgtcgaaaccagtcttgctggtgacgccggcatgtcgctcaagggt
ggcggcagtgtcgttatatcaggcaatcgagctcttgacttgcgcttcaacggcaatgtt
cctttcgcggtgctaagcaccccgcttgcgcagcagggcctggtcgccgacggggtcgcc
accgtcaatctttcgatcggtggaacggcggcagcacctgtcatcaacggcacggtctcg
accaatggcgccaaacttgtcgacgtcagacgcaatcttgccgtcaacaatctcgcagcc
accgtcaccttcaatggcacccaggccgtgatatcgcgcctcagcggcaatctcggcggc
ggcggcacgatttcggcgagcggcaccatcggtatccagccggccggcggctttcccgcc
gacatttcgatcaagctcgacaaggcggtttatgtcgacggaaccctcgtcgtctcgacc
gtcaacgggacagtgggcctgcgcggaccgatcatgagcgccacgctgagcggcaaactg
cggctggacaagacctcgatcaccgtcccggaaaaattgccgacctccctcagcgaaatc
gacatacggcacaagaacgcaccgcgggcggtgcttgcgcagctgcgggatggcggcgga
cggaaaaccggcgagaaatcttccgtcatcaccctcgatctcgaaatcgacgcgccctcg
caaatcttcgtgcgcggccgtggcatcgatgccgagctcggcggccgcgtgacgatccgc
ggaacggccgcggcacccatcgtcaccggcggtttcaccatgcgccgcggccggctgacc
attctcaatcgccgtctgaacttctccgacaagagcaggatcacctttgccggtgatctg
acaccggcgctcgacatggaagccacctccacctccggcacgacgaccctgacggttgat
gtggccggcctcgccaccgatccttcgatcaccttttcctcctcgccgcagctgccgcag
gacgaggtgctggcgcagctgattttcggccagtcgatgtcgaagctgtcgccggtgcag
atcgcccaactcgccgatgccgtcagccagctggccggcaaccgctccacctcgcttttc
gaaggcttgcgcaaccagctcggcgtcgacgatttcgacgtcagcaccgacgagaagggc
cagacgagcgtcagcgtcggccgctatctcaacgaccgcacctatttcgaactgcagcag
ggcggggcggcaggcgccaaggcgatcatcaatctcgatgtcggccgcggcgttaaactg
cgcggcgccgccggcggcaacggggcgggcgaagccggcatcgtttatgagcgtgagtat
tga
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