Rhizobium sophoriradicis: N2597_26155
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Entry
N2597_26155 CDS
T11817
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
rsop Rhizobium sophoriradicis
Brite
KEGG Orthology (KO) [BR:
rsop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsop03000
]
N2597_26155
Transcription factors [BR:
rsop03000
]
Prokaryotic type
Helix-turn-helix
LacI family
N2597_26155
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_4
Peripla_BP_3
LacI
HTH_10
HTH_3
Sigma70_r4
HTH_31
Motif
Other DBs
NCBI-ProteinID:
UWU38069
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Position
pCC511_2:130911..131909
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AA seq
332 aa
AA seq
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MRKSTLEEVAAAAGVSKMTASRALRGAADVSKETREKVLQQAERLSYVGNRLALSLSSQR
TNLVAVVVPSMSNIVFPEMLAGISAGLRGSGMQAVFGISDYDMAKEREIIRDMLSWRPAA
IIVTGLDQPAETVRMLQNAEIPVIQLMDLDGTPIDFNVGLSHGKAGEEMAKALLAAGRRR
FGYIGSAIDRDLRAGKRRAGFEKVLRESGLSFVDERINAPYSSVAHGKRLSLSMLAATRD
LDCIYYSNDDMATGGAFACLELGIASPTEILIAGFNGLDVASALPVRIATSISPRRQMGE
TAAALLLAASSGDESRISEKIIAFTPEITGVG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaatctacattggaagaggttgccgccgcggccggcgtcagcaagatgacggca
tcgcgggcccttcggggcgcggccgacgtctccaaggagacgcgcgaaaaagtgctccag
caggccgagcggctgagctatgtcggcaaccggctggcgctctcgctgtcgtcgcagcgc
accaacctcgtcgccgtcgtcgttcccagcatgtcgaacatcgtctttcccgaaatgctg
gcgggcatctcggccgggttgcggggatcaggcatgcaggccgttttcggcatctccgac
tacgacatggcgaaggagcgcgagatcattcgcgacatgctctcctggcggcctgccgcc
attatcgtgacaggtctcgatcagccggcagaaacggtcagaatgctgcagaatgcggag
atccccgtcatccagctgatggatctcgacggcacgcccatcgatttcaacgtcggcctt
tcgcacggcaaggctggagaagagatggcaaaggcgcttttggcggccggccggcggcgg
ttcggctatatcggcagcgcgatcgaccgagatttgcgggccggcaaacgaagggccggc
ttcgagaaggtgctgcgcgagagtggcctttcattcgtggacgagcggatcaacgccccc
tattcctcggtggcgcacggcaagcggctgtcgctctccatgctcgcggcgacccgggat
ctcgattgcatctattattccaacgatgacatggccacaggcggcgcctttgcatgtctg
gagctcggcattgccagccccacggaaatcctgatcgccggattcaacgggttggatgtt
gccagtgccctccccgtcagaatcgcgacctcgatttcgccacgacgccagatgggtgaa
accgccgccgcgcttctgctcgctgcgagcagcggagacgaaagccgcatatccgagaag
ataattgccttcacgccggagatcaccggggtcggctga
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