Rhizobium sophoriradicis: N2597_27855
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Entry
N2597_27855 CDS
T11817
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
rsop Rhizobium sophoriradicis
Brite
KEGG Orthology (KO) [BR:
rsop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsop03000
]
N2597_27855
Transcription factors [BR:
rsop03000
]
Prokaryotic type
Helix-turn-helix
LacI family
N2597_27855
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_3
LacI
Peripla_BP_1
Peripla_BP_4
HTH_31
HTH_3
HTH_Tnp_ISL3
DUF7317
HTH_IclR
HTH_6
HTH_23
Xre-like-HTH
Sigma54_DBD
TetR_N
TrmB
HTH_10
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
UWU37831
LinkDB
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Position
pCC511_2:501392..502390
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AA seq
332 aa
AA seq
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MELKHQATVTIAEVAEAAGVGESTVSRVLRNHGSFSGKTRERVMAAVERLGYVPNRIAGT
LASTTSRLVAFVIPSLSNIVFADVLRGASAVLEENRYQAVFSVTDYDPGKEQALAAAMLA
WRPAAVMLAGYEHTDGTAKMLRASGCRVVELLDLDGDGLDIAVGFSNRAAGRESAAFLLE
RGYRRIGYVGHDLKRDTRAGKRFSSFCETLDSAGAPLVAQEILAGSSSVENGRLALERLL
ARATDLDAVYFSNDDMALGGYFHCLAQGIAIPSQLAIFGYNGLDIGRAIPQPLSTIRTPR
VATGEIAAQLIVANAPPQAVDLGFELIEGATA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggaactcaaacatcaggcgacggtcaccattgcagaagtcgcggaggcggctggagtc
ggggaaagcacggtgtcgcgcgttctgcgcaaccatggttcgttttcaggcaagacgcgc
gagcgggtgatggctgccgttgaacggctaggctatgtgccgaatcggattgccggaacg
ctcgcgtccaccacctcacgccttgtcgccttcgtcattccctcgctgtccaacatcgtc
tttgccgacgttctacgcggtgccagcgctgttctggaggaaaaccgctatcaggcggtt
ttttcggtgaccgactatgatccgggcaaggagcaagcactcgccgccgcgatgctagcc
tggcggcctgcggcggtgatgctagcaggatacgagcatactgacggcacggcgaagatg
ctgcgcgccagcggatgccgggtcgtggaactgctggatctggacggcgatggccttgat
atcgcggtcggcttctcgaaccgcgcggccggacgcgagagcgctgccttcctgctcgag
cggggttatcgccggatcggctatgtcggtcacgacctgaagcgtgacacccgcgccggc
aagcgcttttccagtttttgcgaaacgctcgattccgccggcgcccccctggtcgcccag
gaaattcttgccggctcatcctcggtggagaacggcaggttggcgctggagcgactgctt
gcacgggcgaccgatctcgatgcggtctatttttccaacgacgacatggcgctcggcggt
tattttcattgtctcgcccaggggatcgcgatcccgtcgcagctcgccatttttggctat
aacggcctcgatatcgggcgggcgataccgcagccgctgtcgaccatccggacgccgcgc
gtggcgacgggtgagatagccgcgcagttgatcgtcgccaacgcgccgccccaggccgtc
gatctcggctttgaactgatcgagggggcaactgcctga
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