Rhizobium sophoriradicis: N2597_30110
Help
Entry
N2597_30110 CDS
T11817
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
rsop Rhizobium sophoriradicis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Autotransporter
PATR
AC_1
Pertactin
Motif
Other DBs
NCBI-ProteinID:
UWU38351
LinkDB
All DBs
Position
pCC511_3:333988..336942
Genome browser
AA seq
984 aa
AA seq
DB search
MLTNNGLIDANNAVAIWSQNTSGLNTVINNETGIIEAGNGTTSTVIGGSGAGALDFTNKG
IIRGSINLANGNDILRLYTGSSVTGNFTGGGGTDAIFLSGDGQSSMAGNFTGFESLVKND
LGRWTLTGTITGVTVATVQNGTLVLTGTNSNYTGQVIIDPAGILEARAQALPTQLVPANN
IANITNNGLVRFTQPDNGTYVGQIVGTGAVEKTGAGTLTLDPSVAAGNTYSGGTFINGGV
VAVGADNALGASTGGVSFNGGTLQLNSSFDLSASRAVTLNVGGGTINTQAFDSTLAQGIT
GPGGLTKTGSGSLVLTGNSDYAGGTVISAGTLQLGNGGTSGSISGNVLNNSLLAFNRSDA
FLVPGIISGSGAVEQNGSGTTVLAGNNTYTGGTTINAGTLQLGNGGTSGSIVGDVANDGS
LAFNRSDSMNFDGVISGLGNVRQIGGGTTILTAQNTYSGATTVEAGTLAAGTTNAFSSTS
STSVLAGGTLDAAGFDQTLSVLTNAGSVIVGGAPGATLTVSGNYVGAGGTLRLNTALGDD
ASTTDRLVVAGNTSGLTTLVVNNVGGKGALTVEGIRVIDVAGSSAGSFALDGDYLFQGEE
AVVGGAYAYRLYKNGIATPNDGDWYLRSALGDAADAASSPLYQPGVPVYEAYAQTLLGLN
GLPTLQQRLGNRYWSGAGNGTLSQGDGPGTIEPAPQPSEGGPTLVEEGGVWARVEGAHQS
FDPRTSTSSADYDLDTWKFQGGLDKQLYESGSGTLMGGITAQYGKASADVSSVFGDGTVN
TDGYGVGATLTWYGQNGFYLDGQAQATWYDSDLSSDFLGGLSRGNGGFGYAFSLETGERF
ALNQSWTLTPQAQLAYSNVDFDNFTDPFGANVSLGRGESLKGRLGLSADYENTWEGASGT
TTRALLYGIANLYYEFLDGTEVGVSGVGFANESDRTWGGIGAGGSYNWNDDKYSLYGEVS
INTSLSNFADSYSLTGTAGFRVKF
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
gtgcttaccaacaatggcctaatcgatgcgaacaatgctgtcgctatctggtcgcagaac
acgtccggcctgaacacggtcatcaacaatgaaaccggaattatcgaagcgggcaacgga
acaaccagcaccgtcatcggtggatcgggcgccggagcgctcgacttcaccaacaaaggc
ataattcgaggcagtatcaatctagccaatggcaatgatatcttgcgtctctataccgga
tcgagtgtcactggcaattttaccggcggcggcgggactgatgcgatcttcctcagcggc
gatgggcaatcgtccatggccggcaacttcaccgggtttgaaagcctcgttaaaaacgat
ctcggaaggtggacgctgacaggtaccattaccggcgtcaccgtcgctacggttcagaac
ggcacgcttgtcctgacggggacgaacagcaactataccgggcaggttatcatcgatcct
gccggcatattggaagcgcgtgcgcaggctctcccgacgcagcttgttcccgcaaacaat
atcgccaacatcaccaataacggccttgtccggtttactcagcccgataatggcacctat
gtcggtcagatcgtcggaaccggtgccgtcgaaaagaccggagcgggcacccttacgctc
gatccctcggtcgcggcgggcaatacctattccggaggaacctttatcaatggcggcgtt
gtcgcggtcggcgccgacaatgcgctgggtgcttcgacgggcggtgtcagtttcaatggc
ggcaccttgcaactcaacagcagtttcgacttatcggccagtcgcgcagtgactttgaat
gtcgggggcggcacgattaatacacaggccttcgattcgaccttggcacagggtataacc
gggcccggcggacttacgaagacgggatcagggtctctggtcctgacgggcaacagcgat
tatgctggtggtaccgtgatctcagcaggcaccctccagcttggaaacggcggaacgagc
ggctcgatctctggcaatgtgttgaacaacagtctcctcgcgttcaaccgctcggacgct
tttttagtgcccgggattatttccggttcgggtgccgtggaacagaacggttcgggcacc
acggtcctcgccggcaacaatacctacactggcggaaccaccatcaacgccgggacactg
cagctcggcaatggcggcacgtcgggctctattgtcggagatgttgccaacgacggttca
cttgcattcaatcgctcggacagcatgaatttcgacggcgtgatatccggcttgggtaac
gtcaggcagatcggcggaggaacgacaattctgaccgcacagaatacgtattcaggtgca
acgacggtcgaggctggaacgctcgcggctgggaccacgaacgcctttagctccacttcg
tcgacttctgtgcttgctggcgggaccctcgatgcggccggattcgatcagacccttagc
gtgctcaccaatgccggatcggtcattgtgggaggcgccccgggagcaacactgactgtc
agcggtaactacgtgggcgcgggtggcactttacgattgaatacggcgctgggcgatgac
gcgtcaacgaccgaccggcttgtcgttgcgggtaacacgtcaggattgacgacgcttgtc
gtgaacaatgttggcggcaagggagcgctgactgtggaagggatacgggtgatcgatgtt
gctggctcttccgccggcagctttgcccttgacggagactatctctttcagggcgaagaa
gccgttgtcggcggcgcctatgcctaccgcctatacaagaatggcatcgcaacgccaaac
gatggtgattggtatctgcgttccgctttaggcgatgcggctgacgccgcatcatcgccg
ctctaccaacccggtgttcccgtttatgaggcctacgcgcagacattgctaggcctgaac
gggctgccaacgctgcaacagcgtcttgggaaccgctattggtcaggagctggcaacgga
acgctgtcccagggtgacggccctggaacgatcgagccggccccgcagccgtctgagggc
ggaccgaccctcgtcgaggaaggcggcgtgtgggcacgcgtcgaaggcgcacatcaaagc
tttgacccgagaacgtcaacgagttccgctgattacgatttggatacatggaagttccaa
ggcggcttggataagcagctttacgaaagcggcagcggcacactcatgggaggcatcacg
gctcagtacggcaaagcgtccgcagatgtgtcctccgtcttcggcgatggcacggtcaat
accgacggctatggcgttggcgctacgctgacctggtatggccagaatggtttctatctt
gacgggcaggcgcaggcgacatggtatgatagtgacctgtcttccgacttcctgggtggg
ctctcgagagggaatggcggtttcggctacgccttcagcttggaaaccggtgaaagattt
gcgttgaaccagagctggacgcttaccccgcaagctcagctcgcatattccaatgtcgat
tttgataacttcacggatcccttcggtgccaatgtttctctcgggagaggcgaaagcctg
aagggccgtcttggactttcggcggattatgaaaatacttgggagggcgcttcaggaacg
acgacccgcgcgcttctttatggcattgccaatctttattacgagttccttgacgggacg
gaggttggcgtatcaggcgtgggctttgccaacgagagcgaccgcacctggggtggtatc
ggcgcgggcggcagctataactggaatgacgacaaatattccctgtatggcgaggtttcc
atcaacaccagcctgtccaacttcgcggacagctacagcctcactgggactgccgggttc
cgggtgaagttctaa
DBGET
integrated database retrieval system
