Cereibacter sphaeroides 2.4.1: RSP_0068
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Entry
RSP_0068 CDS
T00284
Symbol
rpoN2
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN/SigL
KO
K03092
RNA polymerase sigma-54 factor
Organism
rsp
Cereibacter sphaeroides 2.4.1
Pathway
rsp02020
Two-component system
rsp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RSP_0068 (rpoN2)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RSP_0068 (rpoN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsp03021
]
RSP_0068 (rpoN2)
Transcription machinery [BR:
rsp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RSP_0068 (rpoN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_3
HTH_IclR
HTH_23
HTH_Crp_2
Phage_CII
LacI
Sigma70_r4
HTH_Tnp_ISL3
GSPE_N1E
HTH_38
HTH_AsnC-type
HTH_31
DUF6171
Motif
Other DBs
NCBI-ProteinID:
ABA79243
UniProt:
Q3J1U1
LinkDB
All DBs
Position
1:complement(1773956..1775284)
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AA seq
442 aa
AA seq
DB search
MTPGMQLYTAQSFAQRQSLVVTAQLQQAICLLQMPNAELSSFIESQSEENPFIELRLPPA
PVPSAPLGKTAPEDWDRVAGLAADPGPSLYVHVAAEIARLGFDAPQAAAAQVFLDALEPW
GWLGRPMEELAFRAGLSLEAAEALLARLQKIEPAGLFARTLAECLQLQAEEQGLLTPLFA
AVLAHLPLLAAADLKGLCRACGCGMEDLKAVLRSLRGLNPKPGALFDAAPPPQRPPDLVV
SRGAEGWRVDLNRSTLPSVVVRSDAAEGFARTAAPYVGERLSVAKWLARAVEHRNQTTLK
IGAEVVRRQRGFLEEGLARMAPMTLREVADAVGVHESTVSRVSSGLMIATPQGTFPLKSF
FTAALAAREGDTAGSAAAVRHRVRQLVQAESPDDPLSDDAIAKIISDEGVTLARRTVAKY
REQLNIPSSVQRRRQAIVTGAL
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgggaatgcagctttacaccgcacagagcttcgcacagcgccagtcgctcgtg
gtgacggcacagctccagcaggccatctgcctgctgcagatgccgaacgccgaactgtcc
tcgttcatcgagagccagtcggaggaaaaccctttcatcgaactgcgcctgccgccggcg
ccggtgccgtccgctcctctgggcaagaccgcacccgaggactgggaccgcgtggcaggg
cttgccgccgatccggggccgtcgctctatgtgcatgtggcggccgagatcgcgcgtctg
gggttcgatgccccgcaagcggcggccgcccaggtctttctcgacgcgctcgaaccctgg
ggctggctcggtcgcccgatggaggaacttgccttccgcgcgggcctgtcgctcgaggcg
gccgaggcgctgctcgcccggcttcagaagatcgaacccgcagggctctttgcgcgcacg
cttgccgaatgcctgcagcttcaggcggaagagcaggggctgctcaccccgctgttcgcc
gccgttctcgcgcatctcccgctgctggctgcggccgatctcaagggcctgtgccgcgct
tgcggctgcgggatggaggatctgaaggccgtgctgcgcagcctgcgcggtctcaatccc
aagccgggcgcgctgttcgatgccgcccctccgccccagcgaccgccggatctggtggtc
agccgcggcgccgaaggctggcgagtggatctgaaccgctcgacgctgccgtccgtcgtg
gtgcgctcggacgcggcggaaggcttcgcccggacggccgcgccctatgtgggcgagcgg
ctgtcggtcgcgaaatggcttgcaagggccgtcgagcatcgcaaccagaccacgctcaag
atcggcgccgaggtggtccgccggcagcgcggcttcctcgaggaggggctggcgcgcatg
gcgcccatgacgctgcgcgaggtggccgatgcggtgggcgtgcatgaaagcaccgtcagc
cgggtgagctcggggctgatgatcgccacgccgcagggcaccttcccgctgaagtcgttt
ttcaccgcagcgctggccgcccgcgagggcgacacggcgggatcggccgccgctgtccgg
caccgcgtccgccagctcgtgcaggcggaatcgcccgacgatccgctgagcgacgatgcg
atcgcaaagatcatttccgacgagggcgtgacgcttgcccggcgcaccgtcgccaaatat
cgcgagcagctgaacatcccctcgtcggtgcagcgccgccgtcaggccatcgtcaccggc
gcgctctga
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