Cereibacter sphaeroides 2.4.1: RSP_0823
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Entry
RSP_0823 CDS
T00284
Symbol
SHMT
Name
(GenBank) serine hydroxymethyltransferase protein
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rsp
Cereibacter sphaeroides 2.4.1
Pathway
rsp00260
Glycine, serine and threonine metabolism
rsp00460
Cyanoamino acid metabolism
rsp00630
Glyoxylate and dicarboxylate metabolism
rsp00670
One carbon pool by folate
rsp00680
Methane metabolism
rsp01100
Metabolic pathways
rsp01110
Biosynthesis of secondary metabolites
rsp01120
Microbial metabolism in diverse environments
rsp01200
Carbon metabolism
rsp01230
Biosynthesis of amino acids
rsp01240
Biosynthesis of cofactors
rsp04981
Folate transport and metabolism
Module
rsp_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rsp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RSP_0823 (SHMT)
09102 Energy metabolism
00680 Methane metabolism
RSP_0823 (SHMT)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RSP_0823 (SHMT)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RSP_0823 (SHMT)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RSP_0823 (SHMT)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RSP_0823 (SHMT)
Enzymes [BR:
rsp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RSP_0823 (SHMT)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ABA80002
UniProt:
Q3IZN2
LinkDB
All DBs
Position
1:complement(2568147..2569442)
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AA seq
431 aa
AA seq
DB search
MNAPHRDDGFFTESLSSRDPELFASITGELGRQRDEIELIASENIVSRAVMEAQGSVMTN
KYAEGYAGKRYYGGCDYVDVAETLAIERAKQLFGCAYVNVQPNSGSQANQGVFQALIKPG
DTILGMELASGGHLTHGAAPNQSGKWFNAIQYGVRQQDQLIDYDQVAALAREHKPKLIIA
GGSAIPRQIDFARFRAIADEVGALLMVDMAHFAGLVAGGAHPSPFPHADVATTTTHKTLR
GPRGGMILTNSEEIAKKVNSAIFPGIQGGPLMHVIAAKAVAFGEALRPEFKAYAAQVVKN
AQALADELMKGGLDIVTGGTDTHLMLVDLRPKGVKGNATEKALGRAHITCNKNGIPFDPE
KPTVTSGVRLGTPAGTTRGFGEAEFREIGRLIVEVVDGLAANGEEGNAAVEEAVKAKVAA
LCARFPLYPTL
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccccgcaccgcgacgacggcttctttaccgaaagcctctcttcccgcgatccc
gagcttttcgcctcgatcaccggcgaactcggccgccagcgcgacgagatcgagctgatc
gcctcggagaatatcgtgagccgcgccgtgatggaggcgcagggctcggtcatgacgaac
aagtacgccgaaggctatgcgggcaagcgctactacggcggctgcgactatgtcgacgtg
gccgagacgctggccatcgagcgggcgaagcagctgttcggctgcgcctatgtgaacgtg
cagccgaactcgggcagccaggccaaccagggcgtgttccaggcgctcatcaagccgggc
gacaccattctgggcatggagctcgcctcgggcggccacctcacccacggggccgcgccg
aaccagtccggcaagtggttcaacgcgatccagtatggcgtgcgccagcaggaccagctg
atcgattacgatcaggtggcggcgctcgcgcgcgagcacaagcccaagctcatcatcgcg
ggcggctcggccatcccgcgccagatcgacttcgcccgcttccgggccatcgcggatgag
gtgggcgcgctcctgatggtggacatggcccatttcgcgggcctcgtggcgggcggcgcc
catccctcgcccttcccgcatgcggacgtggccaccaccacgacgcacaagacgctgcgc
ggtccgcgcggcggcatgatcctcacgaacagcgaggagatcgcgaagaaggtcaattcg
gccatcttcccgggcatccagggcggtccgctgatgcatgtgatcgcggccaaggcggtg
gccttcggcgaggcgctgcggcccgagttcaaggcctatgccgcgcaggtggtcaagaac
gcgcaggcgctggcggacgagctgatgaagggcgggctcgacatcgtgacgggcggcacc
gacacgcacctgatgctcgtggacctgcggcccaagggcgtgaagggcaatgcgaccgag
aaggcgctgggccgcgcccacatcacctgcaacaagaacggcatcccgttcgaccccgag
aagccgaccgtgacctcgggcgtccggctcggcacgcccgcgggcaccacccgcggcttc
ggtgaggcggagttccgcgagatcggccggctgatcgtcgaagtggtcgacgggctcgcg
gccaacggcgaagagggcaatgcggcggtggaagaggccgttaaggccaaggtcgcggcg
ctctgcgcccgcttcccgctctatccgacgctctga
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