Cereibacter sphaeroides 2.4.1: RSP_0848
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Entry
RSP_0848 CDS
T00284
Symbol
xthA1
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rsp
Cereibacter sphaeroides 2.4.1
Pathway
rsp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RSP_0848 (xthA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsp03400
]
RSP_0848 (xthA1)
Enzymes [BR:
rsp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
RSP_0848 (xthA1)
DNA repair and recombination proteins [BR:
rsp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
RSP_0848 (xthA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
ABA80029
UniProt:
Q3IZK5
LinkDB
All DBs
Position
1:2598504..2599292
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AA seq
262 aa
AA seq
DB search
MTFTLATWNINSVRLREALVSRLLTEEMPDILCLQECKSPVEKMPLEAFRALGYHWCVAR
GQKSYNGVAILSKLPLVDAGDHDFADLGHARHVSAALENGVTIHNCYVPAGGDIPDREQN
VKFGQKLDYLTRMRDWCRADTPKKAILVGDLNIAPREDDVWNHKSLLKIVSHTPIEVDHL
NALMEAGAWIDVTRKDLPEGRLYSWWSYRSPDWEAADKGRRLDHIWATPDIVNAAHGSRI
LKAARGWLQPSDHAPVFATFDL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcaccctcgccacctggaacatcaactcggtccgcctgcgcgaggcgctggtc
tcgcggctgctgacggaggagatgcccgacatcctctgcctgcaggaatgcaagagcccg
gtcgagaagatgccgctcgaggcgttccgggcgctcggctaccactggtgcgtggcgcgc
ggacagaagagctacaacggcgtggcgatcctgtcgaagctgccgctggtggatgcgggc
gaccatgatttcgccgatctcggccatgcgcggcatgtgtcggcggcgctcgagaacggc
gtgacgatccacaattgctatgtccccgccggcggcgacattcccgaccgcgagcagaat
gtgaagttcggccagaagctcgattacctgacgcggatgcgcgactggtgccgggccgac
acgccgaagaaggcgatcctcgtgggcgatctcaacatcgccccgcgcgaggacgatgtc
tggaaccacaagtccctgctgaagatcgtgagccacacgccgatcgaggtggaccatctg
aacgcgctgatggaggcgggcgcctggatcgacgtgacccgcaaggacctgcccgagggg
cggctctattcctggtggtcctaccgctcgcccgactgggaggcggccgacaaggggcgc
cggctcgaccatatctgggccacgcccgacatcgtcaatgccgcgcacggcagccgcatc
ctcaaggcggcgcggggttggctgcagccgtcggaccatgcaccggtcttcgccaccttc
gatctctga
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