Cereibacter sphaeroides 2.4.1: RSP_0946
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Entry
RSP_0946 CDS
T00284
Name
(GenBank) putative DNA topoisomerase I protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rsp
Cereibacter sphaeroides 2.4.1
Brite
KEGG Orthology (KO) [BR:
rsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsp03032
]
RSP_0946
03400 DNA repair and recombination proteins [BR:
rsp03400
]
RSP_0946
Enzymes [BR:
rsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RSP_0946
DNA replication proteins [BR:
rsp03032
]
Prokaryotic type
DNA Topoisomerases
RSP_0946
DNA repair and recombination proteins [BR:
rsp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RSP_0946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
RE_XamI
Motif
Other DBs
NCBI-ProteinID:
ABA80128
UniProt:
Q3IZA6
LinkDB
All DBs
Position
1:2698139..2699173
Genome browser
AA seq
344 aa
AA seq
DB search
MKDGCVLVEMSDGSEATVPRGLVYVTDAEPGITRRRCGRGFVFRGPDGRLLDRAERARIL
RLGVPPAYEKVWICPLENGHLQATGFDARGRKQYRYHPDWGSWRSQAKYALLPAFGEALP
RLRRRVARDLKAEAGELAFSLAALTMLIDRTFLRVGSSAYAEENKTFGATTLLARHVKLK
DGEVRLDFRAKGGKRVRQVLKDRRLHRILQEIEDLPGRNLFTWIDEEGQVRRVASHHVND
YLAEATGLAGASAKTFRTWGGSLAAFAVARATEGKLTVKMMAEGAAERLHNTPTISRTSY
IHPRILGLADLKPDERLAQLEAVQPADLPDLRSDERRMLGFLLG
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggatggctgcgttctggtcgagatgtcggacggcagcgaggccaccgtgccgcgc
ggcctcgtctatgtcaccgatgccgagccgggcatcacccggcggcgctgcgggcgcggc
ttcgtcttccgcggccccgacggcaggcttctggaccgcgccgagcgcgcacggatcctg
cgcctcggggttccgcccgcctacgagaaggtgtggatctgcccgctcgagaacggccat
ctgcaggccaccgggttcgatgcgcgcgggcgcaagcagtatcgctaccaccccgactgg
ggcagctggcggtcgcaggcgaaatacgccctcctgccggccttcggagaggcgctgccc
cgcctgcgccgccgcgtggcccgcgacctcaaggccgaggcgggcgagctcgccttctcg
ctcgcggccctcaccatgctgatcgaccggaccttcctgcgcgtgggcagctcggcctat
gccgaggagaacaagaccttcggcgccaccacgcttctggcgcgccatgtgaagctcaag
gacggcgaggtgcggctcgacttccgcgccaagggcggcaagcgcgtgcgtcaggtgctg
aaggaccgccgcctgcaccgcatcctgcaggagatcgaggacctgccgggccgcaacctc
ttcacctggatcgacgaggagggccaggtgcggcgcgtggcctcgcaccatgtgaacgac
tatctggccgaggccacgggccttgccggcgcctcggccaagaccttccgcacctggggc
ggctcgctcgctgccttcgccgtggcccgggcgaccgagggcaagctcaccgtgaagatg
atggccgaaggcgcggccgagcggctgcacaacacgccgacgatcagccgcacctcctac
atccatccccggatcctcggcctcgcggatctgaagcccgacgagcggctcgcgcagctc
gaggcggtccagcccgccgacctgcccgacctgcgcagcgacgagcgccggatgctcggc
ttcctgctgggctga
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