Cereibacter sphaeroides 2.4.1: RSP_1028
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Entry
RSP_1028 CDS
T00284
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rsp
Cereibacter sphaeroides 2.4.1
Pathway
rsp03030
DNA replication
rsp03410
Base excision repair
rsp03420
Nucleotide excision repair
rsp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RSP_1028
03410 Base excision repair
RSP_1028
03420 Nucleotide excision repair
RSP_1028
03440 Homologous recombination
RSP_1028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsp03032
]
RSP_1028
03400 DNA repair and recombination proteins [BR:
rsp03400
]
RSP_1028
Enzymes [BR:
rsp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RSP_1028
DNA replication proteins [BR:
rsp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RSP_1028
DNA repair and recombination proteins [BR:
rsp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RSP_1028
NER (nucleotide excision repair)
GGR (global genome repair) factors
RSP_1028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
ABA80212
UniProt:
Q3IZ22
LinkDB
All DBs
Position
1:2790380..2793193
Genome browser
AA seq
937 aa
AA seq
DB search
MTFGKGHHLHLIDGSAFIFRAYHALPPLTRKSDGLPVGAVAGFCNMLFRYVENNKGPDAP
THVAVIFDHSSKTFRNEIYPLYKAQRPEPPEDLRPQFPLTREATRAFNIACIETEGFEAD
DIIAALSCKARDAGGSVTILSSDKDLMQLVGDGVEMLDPMKNKRIGRDEVFEKFGVYPER
VVDVQALAGDSIDNVPGAPGIGIKTAALLIQEYGDLESLLARAGEIKQPKRRAAIEENAE
QIRISKRLVALDCNTPLTFSLEDLEVRLPVADDLLGFLNRMEFRTLTTRVAASLKVEPPP
APTAAVLRNEGVPEIVEQVEAALPFDSASYACIRDAEALAAWIARIRDLGHVAIDTETTS
LDEMRAELVGISLCVEAGAACYIPLGHRAGGGDLFGASELVADQMPLGLALSMLKPVLED
ESILKIGQNMKYDAKILARHGIRVAPIDDTMLMSYAMHAGRHGHGMDELCDTYLGHKPIA
IKTLLGSGKSQITFDRVPVEQAVCYAAEDADVTFRLWKLFKPQLHRARVTTVYETLERPL
VPVLAEMEMAGVQVDRDTLSRMSNAFAQKMAGLEAEIHALAGGPFNVGSPKQLGEILFEK
MGLPGGQKGKNGAWGTGADVLEDLAAEGHDLPARVLDWRQLSKLKSTYTDALQEHIHPET
GRVHTSYSIAGANTGRLASTDPNLQNIPVRSEEGRRIREAFVAPPGKLLVSLDYSQIELR
ILAHIADIPALKQAFREGHDIHAMTASEMFNVPLEGMDPMIRRQAKAINFGVIYGISGFG
LARNLRIPRADAQGFIDRYFERFPGIRGYMDETIAFAKANGHVETLFGRRINTPEINAKG
PGAGFARRAAINAPIQGTAADVIRRAMIRMPKAIRGMPATMLLQVHDELLFEVEEEAADA
LIERVREVMEGAADPAVKLTVPLTVEAGRGLNWAAAH
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgacgttcggcaagggccaccatctgcatctcatcgacggttcggccttcatcttccgg
gcctaccatgcgctgccgccgctgacgcggaagtcggacggcctgcccgtgggcgcggtc
gcgggcttctgcaacatgctgttccgctatgtcgagaacaacaagggccccgacgcgccg
acccatgtggcggtgatcttcgaccattcctcgaagaccttccgcaacgagatctacccg
ctctacaaggcgcagcgccccgagccgcccgaggatctgcgcccgcagttcccgctcacg
cgcgaggcgacgcgggccttcaacattgcctgcatcgagaccgaagggttcgaggccgac
gacatcatcgcggccctctcgtgcaaggcgcgcgacgcgggcggctcggtcacgatcctg
tcctcggacaaggatctgatgcagctggtgggcgacggggtcgagatgctcgacccgatg
aagaacaagcggatcggccgcgacgaggtgttcgagaaattcggcgtctaccccgagcgc
gtcgtggatgtgcaggcgctggcgggcgattccatcgacaacgtgccgggcgcgccgggc
atcggcatcaagacggccgcgctgctgatccaggaatacggcgatctcgagagcctgctc
gcgcgggcgggcgagatcaagcagcccaagcgccgcgccgccatcgaggagaatgccgaa
cagatccgcatctcgaagcggctggtggcgcttgactgcaacaccccgcttacgttctcg
ctcgaggatctcgaggtgcgtctgccggtggccgacgaccttctgggctttctcaaccgg
atggaattccgcaccctgacgacccgtgtggccgcgagcctgaaggtcgagccgcctccc
gcccccaccgccgccgtcctccggaacgagggcgtgcccgagatcgtcgagcaggtcgag
gcggcgctgcctttcgacagcgcctcctatgcctgcatccgcgatgccgaggcgctggcc
gcctggatcgcgcgcatccgcgacctgggccatgtcgccatcgacaccgagaccaccagc
ctcgacgagatgcgtgccgaactggtggggatctcgctctgcgtcgaggcgggggccgcc
tgctacatcccgctcggccaccgggctggcggcggcgatctcttcggcgcctcggagctc
gtggccgaccagatgccgctgggtctggcgctgtcgatgctgaagccggtgctcgaggat
gagtccatcctcaagatcggccagaacatgaagtacgacgcgaagatcctcgcgcgtcac
ggcatccgggtggcgccgatcgacgatacgatgctcatgtcctacgcgatgcacgcgggc
cgccacggccacgggatggacgagctctgcgacacctaccttggccacaaacccatcgcg
atcaagacgctcctgggttcgggcaagagccagatcaccttcgaccgggtgccggtcgag
caggccgtctgctatgcggccgaggatgcggatgtgaccttccggctctggaagctgttc
aagccgcagctgcaccgcgcccgggtgacgacggtctacgagacgctcgagcggccgctg
gtgccggtgctggccgagatggagatggcgggcgttcaggtcgaccgcgacacgctctcg
cggatgtcgaacgccttcgcgcagaagatggcggggctcgaggccgagatccacgcgctg
gcgggcggcccgttcaacgtgggcagccccaagcagctgggcgagatcctgttcgagaag
atgggcctgcccgggggccagaagggcaagaacggcgcctggggcaccggggccgacgtg
ctcgaggatctggcggccgaggggcacgacctgcccgcgcgcgtgctcgactggcgccag
ctctccaagctgaaatcgacctacaccgacgcgctgcaggagcatatccaccccgagacg
ggccgcgtccacacctcctattccatcgccggagcgaacacgggccgcctcgcctcgacc
gatccgaacctccagaacatccccgtgcgcagcgaggagggccgccgcatccgcgaggcc
ttcgtggcgccgccgggcaagcttctggtcagcctcgactacagccagatcgagctgcgc
atcctcgcccatatcgccgacattccggcgctgaagcaggccttccgcgaggggcacgac
atccatgcgatgaccgcctccgagatgttcaacgtgccgctcgaaggcatggatccgatg
atccggcggcaggccaaggccatcaacttcggcgtgatctacgggatctcgggcttcggc
ctcgcacgcaacctgcgcatcccgcgggccgatgcgcagggcttcatcgaccgctatttc
gagcgtttccccggcatccgcggctatatggacgagaccatcgccttcgccaaggcgaac
ggtcatgtggaaaccctgttcggacgcaggatcaacacgcccgagatcaatgccaagggg
cccggcgcgggcttcgcgcgccgcgcggccatcaacgcgccgatccagggcacggcggcc
gacgtgatccgccgggcgatgatccggatgccgaaggcgatccggggcatgcccgcgacc
atgctgctgcaggtccatgacgaactgctgttcgaggtggaggaagaggccgctgacgcg
ctcatcgagcgcgtgcgcgaggtgatggaaggtgcggccgacccggcggtgaagctcacc
gtgccgctgacggtggaggcgggccgcggcctgaactgggccgccgcccactga
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