Cereibacter sphaeroides 2.4.1: RSP_1202
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Entry
RSP_1202 CDS
T00284
Symbol
TrmA
Name
(GenBank) 23S rRNA m(5)U-1939 methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
rsp
Cereibacter sphaeroides 2.4.1
Brite
KEGG Orthology (KO) [BR:
rsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsp03009
]
RSP_1202 (TrmA)
Enzymes [BR:
rsp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
RSP_1202 (TrmA)
Ribosome biogenesis [BR:
rsp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RSP_1202 (TrmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Cons_hypoth95
Met_10
TRAM
Motif
Other DBs
NCBI-ProteinID:
ABA80384
UniProt:
Q3IYK0
LinkDB
All DBs
Position
1:complement(2971452..2972666)
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AA seq
404 aa
AA seq
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MIVTIERLGHLGDGIGQGVFVSGALPGETVEGEVVQDRMAAPRIVTPSPDRVRPPCPHAR
SCGGCLLQHASDGFVADWKQEVVRSALAGQGIEAPFRPLAVSPPASRRRATLSARRTKGG
ALVGFHARQSGTIVAIPECKLLHPDLMAAMPALEALVKTGGSRSGELSLTVTRSLGGPDV
AVTGGKPLDAGLRAALAQVAEAQALARLTWEGETIALRVPPAQAFGPARVVPPPSAFLQA
TAEGEAALLSAVRDAIGEARTVTDLFGGAGTFSLPLAAGAEVHAVEGDAAMMAALDRGWR
QAPGLKRVTVETRDLFRRPLEPDELRKTEAVVIDPPRAGAEAQTRALARAAVPVVAFVSC
NPVTFARDALILVRGGYRLDWVQVVDQFRWSSHVELAARFSRPV
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgtcaccatcgagaggctgggccatctgggcgacggcatcgggcagggcgtcttc
gtgtccggcgcgctgccgggcgagacggtcgagggcgaggtggtgcaggaccgcatggcc
gcgccgcgcatcgtgacgccctcgcccgaccgcgtgcgcccgccctgtccccatgcccgc
agctgcggcggctgtctgctgcagcatgcctccgacggattcgtggccgactggaagcag
gaggtcgtgcgctcggccctcgccggacaggggatcgaggcgccgttccgccccctcgcc
gtctcaccgcccgcctcgcgccggcgcgcgaccctctcggcgcggcgcaccaagggcggc
gcgctcgtgggcttccacgcccgccagtcgggcacgatcgtcgcgatccccgagtgcaag
ctgctgcatcccgacctgatggcggccatgcccgcgctcgaggcgctggtgaagaccggc
ggctcgcgctcgggcgagctgtcgctcaccgtgacgcgcagcctcggcgggcccgacgtg
gcggtgacgggcggcaagccgctcgacgcgggcctgcgggcggccctcgcgcaggtggcc
gaggcgcaggccctcgcgcggctgacgtgggagggcgagaccattgccctccgcgtgccc
ccggcgcaggccttcgggccggcgcgtgtggttccgccgccgagcgccttcctgcaggcg
acggccgagggcgaggcggcgctgctttctgccgtgcgcgatgccatcggcgaagcgcga
acggtgacggatctttttggcggtgcgggcaccttcagcctgccgctcgcagccggggcc
gaggtccatgccgtcgagggcgatgcggcgatgatggcggcgctcgaccgcggctggcgg
caggcgccggggctgaagcgggtgacggtggaaacgcgcgacctgttccgccgcccgctc
gagcccgacgagctccgcaagaccgaggccgtggtgatcgatccgccacgcgccggagcc
gaggctcagacccgggcgctcgcccgcgccgcggtgccggtcgtggccttcgtctcctgc
aaccccgtgaccttcgcccgcgacgcgctgatcctggtgcgcggcggctaccggctcgac
tgggtgcaggtcgtcgaccagttccgctggtcgtcgcatgtcgagcttgccgcgcgcttc
agccgccccgtctga
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