Cereibacter sphaeroides 2.4.1: RSP_1230
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Entry
RSP_1230 CDS
T00284
Symbol
thdF
Name
(GenBank) tRNA modification GTPase trmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
rsp
Cereibacter sphaeroides 2.4.1
Brite
KEGG Orthology (KO) [BR:
rsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsp03016
]
RSP_1230 (thdF)
Transfer RNA biogenesis [BR:
rsp03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
RSP_1230 (thdF)
Prokaryotic type
Methyltransferases
RSP_1230 (thdF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
AAA_28
ABC_tran
AAA_29
RsgA_GTPase
AAA_18
GBP
FtsK_SpoIIIE
ABC_ATPase
TniB
GTP_EFTU
Phage_phiJL001_Gp84_N
Fic_N
AIG1
Motif
Other DBs
NCBI-ProteinID:
ABA80411
UniProt:
Q3IYH3
LinkDB
All DBs
Position
1:complement(3001583..3002869)
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AA seq
428 aa
AA seq
DB search
MDTIYALASARGKAGVAVLRLSGPRSHEAVQAFGVPLPSLRHAALRRLTWNGEVLDEALV
LLFGAGASFTGETSAELHLHGSPAAVSSVLRVLSGLPGLRAAEAGEFTRRALENGRLDLA
QVEGLADLIDAETEAQRRQAMRVFSGAIGERAERWRADLIRAAALLEATIDFADEDVPVD
VTPEVLTLIDGLLADLRREVDGSRIAERIRDGFEVAIVGAPNAGKSTLLNALARREAAIT
SEIAGTTRDVIEVRMDLDGLPVTFLDTAGLRDTSDLVESLGIERAVTRAKAADLRVFLLD
DSGPLSGITVQADDLVVQGKADLRPGQGLRLSGRTGEGVPELVAAIGERLLGRTAGAGSL
TRERHRLAIERAIGAMESVRAELLRGQQHTELAADDLRRAIRSLDSLVGRVDVESLLGEI
FASFCIGK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggacacgatctacgccttggccagcgcacgcggcaaggccggagtggcggttttgcgc
ctttccggaccgcggtcgcatgaggcggtgcaggcgttcggcgttcctttgccttctctc
cggcacgccgccctgcggcgtctgacgtggaacggtgaagttctcgacgaagcgctggtg
ctgctcttcggcgctggcgccagtttcactggtgaaacctcggccgaactgcatctccat
ggtagtcctgctgccgtctcttcggtgctccgggtcctgtccggcctgcccgggctgagg
gcggccgaagccggggagttcacccgccgggccctggagaacggtcggctcgacctcgcg
caggtcgaggggctggctgacctgatcgatgccgagacggaagctcagcgccgtcaggcg
atgcgggtcttttccggcgccatcggtgagcgggcagagcggtggcgggcggacctcatt
cgggcagcggcgctgctcgaggcgaccatcgatttcgccgatgaggatgtgccggtcgat
gtgacgcccgaagtgctgaccctgatcgacggcctgttggcggatcttcggcgggaggtc
gacggatcgcggattgcggaacggatccgcgacggattcgaggtcgccatcgttggcgcg
cccaatgccgggaaatccacgcttctcaatgcgctggcgcgaagagaggcggcgatcacc
tctgagatcgccggcacgacgcgcgatgtaatcgaggtgcggatggatctcgacgggctt
cctgtgaccttcctggacacggcgggactgcgggacacgtcggaccttgtcgagagcctt
ggcatcgaacgcgccgtgacccgggccaaggccgcggacctgcgtgttttccttctggac
gacagcggaccattgtccggcatcaccgttcaggctgatgatctggttgtgcagggaaag
gcagaccttcgaccggggcaggggctgcgcctctcgggccggacgggagagggcgtgcca
gaactcgtggccgccatcggcgagaggcttctgggacgcactgcaggtgccggaagtttg
acccgcgagcggcaccgtctcgccatcgaacgcgcaatcggggctatggaatcggtgcgg
gctgagctattgaggggccaacagcacacggaactggcggcagatgacctgcgacgcgcg
atccgctccctcgactctctcgtggggagggtggatgtggagtcgcttctgggcgagatc
tttgccagcttctgcatcgggaagtga
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