Cereibacter sphaeroides 2.4.1: RSP_1236
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Entry
RSP_1236 CDS
T00284
Symbol
dnaQ
Name
(GenBank) putative DNA polymerase III, epsilon subunit-related 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rsp
Cereibacter sphaeroides 2.4.1
Pathway
rsp03030
DNA replication
rsp03430
Mismatch repair
rsp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RSP_1236 (dnaQ)
03430 Mismatch repair
RSP_1236 (dnaQ)
03440 Homologous recombination
RSP_1236 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsp03032
]
RSP_1236 (dnaQ)
03400 DNA repair and recombination proteins [BR:
rsp03400
]
RSP_1236 (dnaQ)
Enzymes [BR:
rsp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RSP_1236 (dnaQ)
DNA replication proteins [BR:
rsp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RSP_1236 (dnaQ)
DNA repair and recombination proteins [BR:
rsp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RSP_1236 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ABA80417
UniProt:
Q3IYG7
LinkDB
All DBs
Position
1:3007197..3007886
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AA seq
229 aa
AA seq
DB search
MREIVLDTETTGFEPSEGHRIVEIGAVELFNHMPTGRTYHQYINPERPMPNEAFEVHGLG
DEFLRDKPVFAAIGRAFLDFVGEARLVIHNAAFDMKFLNFELGRAGLPRLAPDQALDTLA
LARQRFPGAPATLDALCRRFGVDNSAREKHGALLDSEILAEVYLELIGGRQPDFGLASSA
GARPGSPEGEWRPRPRPVALPPRITEEEAAAHAAFVAKLGDGAIWLKRA
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagatcgtcctcgacaccgaaaccaccggcttcgagccctccgaggggcaccgg
atcgtcgagatcggcgcggtcgagctcttcaaccacatgccgacggggcgcacctaccac
cagtatatcaaccccgagcgcccgatgccgaacgaggccttcgaggttcacggcctcgga
gacgagttcctgcgcgacaagccggtctttgcggccatcggacgcgccttcctcgatttc
gtgggcgaggcccgcctcgtgatccacaacgccgccttcgacatgaaattcctgaatttc
gagctcgggcgcgccggcctgccccgcctcgcgcccgatcaggcgctcgacacgctggcc
ctggcgcggcagcggtttccgggcgcgcccgccacgctcgatgcgctgtgccgccgcttc
ggcgtcgacaattcggcgcgcgaaaagcacggggcgctgctcgacagcgagatcctggca
gaggtctatctggaactgatcggcgggcggcagccggatttcggactggccagctcggcc
ggtgcgcgtccgggcagcccggagggcgaatggcgcccgcgtccccggcccgtggcgctg
ccgccgcgcatcaccgaggaagaggccgccgcccatgctgccttcgtggcgaagctgggc
gacggcgcgatctggctcaaacgggcctga
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