Cereibacter sphaeroides 2.4.1: RSP_1669
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Entry
RSP_1669 CDS
T00284
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
rsp
Cereibacter sphaeroides 2.4.1
Pathway
rsp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rsp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RSP_1669 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsp03021
]
RSP_1669 (rpoZ)
03400 DNA repair and recombination proteins [BR:
rsp03400
]
RSP_1669 (rpoZ)
Enzymes [BR:
rsp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RSP_1669 (rpoZ)
Transcription machinery [BR:
rsp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RSP_1669 (rpoZ)
DNA repair and recombination proteins [BR:
rsp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RSP_1669 (rpoZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
RXLR
Motif
Other DBs
NCBI-ProteinID:
ABA77817
UniProt:
Q3J5W7
LinkDB
All DBs
Position
1:260171..260524
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AA seq
117 aa
AA seq
DB search
MARVTVEDCVDKVPNRFELVMLAAHRAREIASGSSLTIDRDNDKNPVVALREIAEETQSA
ESLRERMIESHQTQIEVDEPEEDQMALLMGSEVDRPVQDDMSEEKLLRALMEAQGQN
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgtgacggttgaagactgcgttgacaaggtcccgaaccggttcgagctggtg
atgctggctgcccatcgggcacgcgagatcgcctcgggctcgtcgctgaccatcgaccgc
gacaatgacaagaaccctgtcgtggcgctgcgcgagatcgcggaagagacccagagcgcc
gagtcgctgcgcgagcgcatgatcgagagccaccagacccagatcgaggtggacgagccg
gaagaggatcagatggcgctgctcatgggcagcgaggtcgaccgcccggtgcaggacgac
atgtccgaagagaagctgctgcgtgcgctcatggaagcgcaggggcagaactga
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