Cereibacter sphaeroides 2.4.1: RSP_2083
Help
Entry
RSP_2083 CDS
T00284
Symbol
uvrB
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
rsp
Cereibacter sphaeroides 2.4.1
Pathway
rsp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RSP_2083 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsp03400
]
RSP_2083 (uvrB)
DNA repair and recombination proteins [BR:
rsp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RSP_2083 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RSP_2083 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
DUF87
AAA_19
AAA
Kinesin
AAA_16
TrwB_AAD_bind
rrnAC1427_C
Motif
Other DBs
NCBI-ProteinID:
ABA78238
UniProt:
Q3J4P6
LinkDB
All DBs
Position
1:676888..679071
Genome browser
AA seq
727 aa
AA seq
DB search
MPHNNTNLPMHRPEVLTRPKLEGGRRFEMKTPFQPAGDQPTAIAELAAGVQGGEQNQVLL
GATGTGKTFTMAKIIEETQRPAIILAPNKTLAAQLYGEFKGFFPENAVEYFVSYYDYYQP
EAYVARSDTYIEKESQINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVETYSAMT
QDLIVGESYDQRQVIAELVAQQYRRNDQAFQRGSFRVRGDSLEVWPAHLEDRAWRFSFFG
EELESIVEFDPLTGAKTDSFKQIRIYANSHYVTPRPTMQQAIQGIKRELRQRLDQLVNEG
KLLEAQRLEQRTNFDLEMLEATGVCNGIENYSRYLTGRAPGEPPPTLFEFIPDNAIVFAD
ESHVTVPQIGGMYRGDYRRKFTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVSATPAA
WELEQAGGVFAEQVIRPTGLLDPVVEIRPVEMQVDDLLDEIRRVAAAGLRVLVTVLTKRM
AEDLTEYFHEQGIRIRYMHSDIDTIERIEILRDLRLGAFDVLVGINLLREGLDIPECGLV
AILDADKEGFLRSETSLIQTIGRAARNADGRVIMYADRITGSMERALRETERRREKQIAY
NIEHGITPQTVRKNVEDVLAGLWQGDTDQSRVTAKVDKPMVGANLAAHLDGLRVSMRKAA
ENLEFEEAARLRDEIKRLEAVELAISDDPLARQTAVEEAAEAAVKSSGRSTAGRAGQRGG
NKRRRGH
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgccgcacaacaatacgaacctgccgatgcatcgtcccgaggtgctgacccgcccgaag
ctcgaaggcggtcggcgtttcgagatgaagaccccgttccagcccgcgggcgaccagccc
acggccattgccgaactggccgccggggtgcaggggggcgagcagaaccaggtgctgctc
ggggcgaccggcaccggcaagaccttcacgatggccaagatcatcgaggagacccagcgt
ccggcgatcatccttgccccgaacaagacgctggcggcacagctctacggcgagttcaag
ggcttcttccccgagaatgccgtggaatatttcgtctcctactacgactactaccagccc
gaggcctatgtggcgcgctcggacacctacatcgagaaggaatcgcagatcaacgagcag
atcgaccggatgcgccactcggccacccgggcgttgctcgagcgcgacgacgtcatcatc
gtggcctcggtctcctgcatctacggcatcggctcggtcgaaacctattcggcgatgacg
caggatctgatcgtgggcgagagctacgaccagcggcaggtgatcgcggaacttgtggcg
cagcagtaccgccgcaacgaccaggccttccagcgcggcagcttccgcgtgcggggcgat
tcgctcgaggtctggcctgcccacctcgaggatcgcgcctggcgcttctccttcttcggg
gaagagctggagagcatcgtcgagttcgatccgctgaccggcgccaagaccgacagcttc
aagcagatccgcatctatgcgaattcgcactatgtgacgccgcgcccgacgatgcagcag
gccattcagggcatcaagcgcgagctgcgccagcggctcgaccagctcgtgaacgagggc
aagctcctcgaggctcagcggctggagcagcgcacgaacttcgacctcgagatgctggaa
gccaccggcgtctgcaacggcatcgagaactactcgcgctatctgacgggccgggccccg
ggcgaaccgccgccgacgctgttcgaattcatccccgacaatgccatcgtcttcgccgac
gagagccacgtcaccgtgccgcagatcggcggcatgtatcgcggcgactatcggcgcaag
ttcacgctggccgagcacggcttccggctgccctcctgcatggacaaccgaccgctcaag
ttcgaggagtgggacgcgatgcgcccgcagtcggtcttcgtctcggccacgcccgccgcg
tgggaactggagcaggcgggcggcgtcttcgccgagcaggtgatccggcccacggggctt
ctcgatccggtggtcgagatccgccccgtcgagatgcaggtggacgacctgctggacgag
atccgcagggtcgcggccgcgggcctgcgcgtcctcgtcacggtgctgaccaagcgcatg
gccgaggatctgacggaatatttccacgagcagggcatccgcatccgctacatgcactcg
gacatcgatacgatcgagcggatcgagatcctgcgcgacctgcggctcggggccttcgac
gtgctggtggggatcaacctcctgcgcgaggggctcgacatcccggaatgcgggctggtg
gcgatcctcgatgccgacaaggagggcttcctgcgctccgagacctcgctgatccagacc
atcggccgcgcggcacggaatgcggacgggcgcgtcatcatgtatgccgaccggatcacc
ggcagcatggagcgcgcgctgcgcgagacagaacggcggcgcgagaagcagatcgcctac
aacatcgaacatggcatcacgccgcagaccgtgcgcaagaacgtcgaggatgtgctggcg
ggcctctggcagggcgataccgaccagagccgcgtcacggccaaggtcgacaagccgatg
gtcggggcgaacctcgcagcccacctcgacgggctgcgtgtctcgatgcggaaggcggcc
gagaacctggagttcgaggaagcggcgcggctgcgcgacgagatcaagcggctcgaggcg
gtggaactggccatttccgacgatcctctggcgcgccagactgcggtcgaggaggcggcc
gaggccgcggtcaagagctcgggccgcagcacggccggccgcgcgggccagcgcggcggc
aacaagcgccgccggggccactga
DBGET
integrated database retrieval system
