Cereibacter sphaeroides 2.4.1: RSP_2092
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Entry
RSP_2092 CDS
T00284
Name
(GenBank) ATP-dependent DNA helicase, Rep family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rsp
Cereibacter sphaeroides 2.4.1
Pathway
rsp03420
Nucleotide excision repair
rsp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RSP_2092
03430 Mismatch repair
RSP_2092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsp03400
]
RSP_2092
Enzymes [BR:
rsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RSP_2092
DNA repair and recombination proteins [BR:
rsp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RSP_2092
MMR (mismatch excision repair)
Other MMR factors
RSP_2092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ABA78246
UniProt:
Q3J4N8
LinkDB
All DBs
Position
1:688019..690370
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AA seq
783 aa
AA seq
DB search
MSQIDESEAFEAAVPLSQRAMAARPRPYIDELNPAQRAAVLALDGPVLMLAGAGTGKTKA
LTARIVHLLDSGKARPNEILAVTFTNKAAREMKDRVARLLGQVEGMPWMGTFHAISVKIL
RRHAELVGLKSNFTILDTDDQLRLLKQLIVAANIDEKRWPARMLAGLIDHWKNRAWTPAK
VPASEASAYNNRGTELYDQYQQRLRELNATDFGDLLLHVLTIFQSHPDVLEQYRRWLRYI
LVDEYQDTNVAQYMWLRLLAQTHRNICCVGDDDQSIYGWRGAEVGNILRFEKDFPGAQVI
RLEQNYRSTPHILAAASGIIAANAGRLGKTLWTERQEGEKVRLIGHWDGEEEARWIGDEV
ESFQRGRGGLGPFRLDDMAILVRASHQMRAFEDRFLTIGLPYRVIGGPRFYERLEIRDAM
AYFRLAVSPDDDLAFERVVNQPKRGLGDKAQQEIQREARAHGTSLLEGARSLLARGGIGG
KGAGQLRAFVDGMDRWHGTTLDRDHDHIRLAEQILDESGYTAMWQADKTPEAPGRLENLK
ELVKALEQFENLQGFLEHVALIMENETEESVDKVTIMTLHAAKGLEFPVVFLPGWEDGLF
PSQRAMDETGLKGLEEERRLAYVGITRAEQLCTISFAANRRVYGQWQSQLPSRFIDELPS
AHVEVLTPPGLYGGGYGAAGMASSLEAQALRADVYDSPGWKRMQTRAGGRPMAQPRESRH
VTIDLEAVSAFAEGDRVFHQKFGYGHVMGIEGDKLDIDFEKAGAKKVVARFVVAAHQADD
IPF
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgagccagatcgatgaaagcgaagccttcgaggcggccgtgccgctcagccagcgcgcc
atggccgcgcgcccacgtccctatatcgacgagctgaatccggcgcagcgtgcggcggtt
ctggcgctggatggaccggtgctgatgctggccggggcgggcaccggcaagacgaaggcg
ctgacggcgcgaatcgtgcatctgctcgattcgggaaaggcgcggccgaacgagatcctc
gccgtgaccttcaccaacaaggccgcgcgcgagatgaaggaccgggtggcccgccttctg
gggcaggtcgagggcatgccctggatgggcaccttccacgccatcagcgtcaagatcctg
cgccggcacgccgaactggtggggctgaagtcgaacttcaccatcctcgacaccgacgac
cagctccggctgctgaagcagctgatcgtcgccgccaacatcgacgagaagcgctggccc
gcccggatgctggccggcctcatcgaccactggaagaaccgcgcctggacgccggccaaa
gtgcccgcctcggaggcgtcggcctacaacaaccgcggcaccgaactctacgaccagtat
cagcagcgcctgcgcgagctgaatgccaccgatttcggcgacctgctgctccatgtgctg
acgatcttccagtcgcaccccgacgtgctcgagcaatatcgccgctggctgcgctacatc
ctcgtggacgaatatcaggacacgaacgtcgcgcaatatatgtggctcaggcttctggcg
cagacgcaccgcaacatctgctgcgtgggcgacgacgaccagtcgatctacggctggcgc
ggggccgaggtgggcaacatcctgcggttcgagaaggattttcccggcgcgcaggtgatc
cggctcgaacagaactaccgctcgaccccgcatatcctcgccgccgcctcgggcatcatc
gcggccaatgcgggccggctcggcaagacgctctggaccgagcggcaggagggcgagaag
gtccggctgatcggccactgggacggcgaggaagaggcccgctggatcggcgacgaggtc
gagagcttccagcgcggccgcggcggcctcggccccttccgtctcgatgacatggcgatc
ctcgtgcgcgccagccaccagatgcgcgccttcgaggaccggttcctgaccatcgggctg
ccctatcgcgtcatcggcggcccgcgcttctacgagcggctcgagatccgggatgcgatg
gcctatttccgcctcgccgtcagcccggacgacgatctggccttcgagcgggtggtgaac
cagccgaagcgcggactgggcgacaaggcccagcaggagatccagcgtgaggcccgcgcc
catggcacctcgcttctcgaaggcgcgcgcagccttctggcccgcggcggcatcggcggg
aagggggcggggcagctccgcgccttcgtcgacggcatggaccgctggcacggcaccacg
ctcgaccgcgaccatgaccatatccgcctcgccgagcagatcctcgacgagtcgggctac
accgccatgtggcaggccgacaagacgcccgaggcgccgggccggctcgagaacctcaag
gagctggtgaaggcgctcgagcagttcgagaacctgcagggattcctcgagcacgtcgcc
ctcatcatggagaacgagaccgaggaatcggtcgacaaagtcacgatcatgacgctccac
gcggccaaggggctggagtttcccgtcgtcttcctgccgggctgggaggacgggctgttc
ccgtcacagcgcgcgatggacgagaccggcctcaaggggctcgaggaggagcggcggctg
gcctatgtcggcatcacccgtgccgagcagctctgcaccatctcctttgcggccaaccgc
cgggtctatggccagtggcagagccagctgccgtcgcgcttcatcgacgagctgccgtcc
gcccatgtcgaagtgctcaccccgccgggcctctatggcggcggctacggcgcggccggc
atggcctcctcgctggaagcgcaggccctgcgggccgatgtctacgattcgcccggctgg
aagcggatgcagacccgtgccggcggccgcccgatggcccagccgcgcgaatcgcgccat
gtcaccatcgacctcgaagccgtctcggccttcgccgagggcgaccgcgtcttccaccag
aagttcggctatggccatgtcatgggaatcgagggcgacaagctcgacatcgatttcgag
aaggcgggagcgaagaaggtcgtggcccgcttcgtggtggcggcgcatcaggccgacgac
atccccttctag
DBGET
integrated database retrieval system
