Cereibacter sphaeroides 2.4.1: RSP_2657
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Entry
RSP_2657 CDS
T00284
Symbol
xthA
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rsp
Cereibacter sphaeroides 2.4.1
Pathway
rsp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RSP_2657 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsp03400
]
RSP_2657 (xthA)
Enzymes [BR:
rsp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
RSP_2657 (xthA)
DNA repair and recombination proteins [BR:
rsp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
RSP_2657 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ABA78812
UniProt:
Q3J322
LinkDB
All DBs
Position
1:complement(1299306..1300085)
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AA seq
259 aa
AA seq
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MKIATFNINGVKARLEALLAWLEAAEPDVVLLQEIKSVDEGFPRAAFEDKGWHLETHGQK
GFNGVAILSRLPLEDVVRGLPGDPEDVQARWIEATVVGERAVRVCGLYLPNGNPAPGPKY
DYKLGWMERMKARAAELLATEEPVVLAGDYNVIPQAEDAARPEVWVTDALFLPESRAAFR
RIVNLGYTEAFRARTFGPGHYSFWDYQAGAWEKNNGIRIDHLLLSPQAADLMTDVRIDRE
VRSGEKPSDHVPVWVELAA
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgctaccttcaacatcaacggcgtcaaggcgcgcctcgaggcgctgctggcc
tggctggaggcggcggagcctgacgtggtgctgctgcaggagatcaagtcggtcgacgag
ggcttcccccgtgccgccttcgaggacaagggctggcatctcgagacgcacgggcagaag
ggcttcaacggcgtggcgatcctgtcgcgcctgccgctcgaggatgtggtgcgcggcctg
ccgggcgacccggaggatgtgcaggcgcgctggatcgaggccaccgttgtgggcgagcgc
gcggtgcgggtctgcgggctctacctgcccaacggcaaccctgcgccgggaccgaaatac
gattacaagctcggctggatggagcggatgaaggcgcgcgcggccgagcttctcgccacc
gaggagcccgtggtgctggccggcgactacaacgtgattccgcaggccgaggatgcggcg
cggcccgaggtctgggtgacggatgcgctgttcctgcccgagagccgggccgccttccgc
cggatcgtgaacctcggctataccgaggccttccgcgcccgcaccttcgggccgggccat
tacagcttctgggactatcaggccggtgcctgggagaagaacaacggcatccgcatcgac
catctgctgctctcgccgcaggcggcggacctgatgaccgatgtccgcatcgaccgcgag
gtccgctcgggcgagaaaccctcggaccatgtgccggtctgggtcgagctggcggcctga
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