Cereibacter sphaeroides 2.4.1: RSP_3539
Help
Entry
RSP_3539 CDS
T00284
Name
(GenBank) Hemolysin-type calcium-binding region, RTX
Organism
rsp
Cereibacter sphaeroides 2.4.1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HemolysinCabind
Cadherin_4
Big_9
Olfactory_mark
Motif
Other DBs
NCBI-ProteinID:
ABA81140
UniProt:
Q3IWE4
LinkDB
All DBs
Position
2:complement(622548..630437)
Genome browser
AA seq
2629 aa
AA seq
DB search
MPTVNLTSALTFSEGGVPQLVDPNITITGGGAFTEGYIEFSVSSPTAGDNFSLTSAANPL
ANGAISFENGDVYLGTGSARERIGSVDATFDGQDGQPLRILFSSPLPNAGFEEGEANWTI
RDEQYGDNGSELNLDGLQITLANDSAYSGGTGTTNVQASAGMTWDGSVQDGAGVDGSRAL
YLGSGGNIVAGDQNPAGGYQVNGYGSIHGPYATSSVITVAQGDSISLDFQAVGTSDDYEV
FGFLRRVDANGNFLSNSVSSPDNILLFAQRGDDTSGWTTISKDGLPAGSYRFEFVGGTYD
GTGGLAVGSNLFVDNIRLISATSVNDSIAQAIARQVAYQNDANDAPVTRQITVTAVDGNG
ISGSSSNGLTFEGENDAPSLANTTLTSIAEDSSPAGQTIAAAFGGSFSDPDNAYSPTDSM
AGVVITGNAATGAQGDWQYSTDGGTTWISVGSVTSQSGLVLSSATLIRFEPALNWNGTPG
ALTLHALDSTYGGSFTSGTTAVNLDTTGATGTGALSQNSATGSITVTPVNDAPVFTAAPV
ALTVADTEAVDTPAALTGSISASDLHGGAPGEGGTLSYGVQGGVSANGFSVLTLPYGTLS
VNQSTGAYSFLPNPTALNSLAEGAEANFSFTLTVSDGQGGTQTAPLDITFTGANDVPVVS
AQTGTAVEASGLNNNVAGSAATGSLLTGPNAATDIDGDEISVVGVRTGGQSETGTEGVWT
DGTITLQGTYGTLTLNEDGSWSYAADDDNPTVDGLTGPTDTLEETFTYTVTDANGATASQ
ELTVTISGRNDALNVSSSIGTDISTGEDADTQIDLTGLVFEDPDLGSEIYEFAVDAGQGT
LWTEGVDGLTVTGNGTGQLVLTGSATAISEWIAANDLTYRSPVEGSGADTISLSYSEAGA
EVRTALESIDVAVDMINDPAVVDVNGSVTTQGSAGVAEVAQVTFLSTGTAQVLNFDGVQM
QIAAGSTAAEIAEAFAAQEFPNWTVSLDGEGRVTLTATATGARPDLTAADFTNGSGAFSP
LVETTGGTDGSINFTARGPAIAILPTLELSDVDSAMMSGAKVSMTEGLFDNGFGTIYERL
SLSAEAREFAQQNGVGISIVTTAAAGSVITFTGMASAEVYETILRGVIYSNTNPNAVAGT
RPVKIEVTDSDGLASSLSSVNLTEGNTDIAVGQRIFINGVDSGQVVSMVRDATSFVASGP
LADLEPGAVLSFHDGSGQQTTAVSAGDGTATMDVNVIWAPVIDMNGAGAGDIHRTTYIEQ
HAPIAIATADARIVDQEGLIRSLDVVLTNPLDNVEGSAPVEYLGISKAVLDVLAARGITI
GAHDGQFDANGNLTGATSITFAAANGASATSFQIALRGVTYANMDDAPDTGTRIVTAQGT
DMDGNEGLISHTEINPIAVGDAPVAIDSGVTGSEDAGHVFAAGDFGFADPLDGGANQLAS
ITINSLPATGTLLLGGVAVAVGTVVTLAQLQAGALTYQPVANVNGEGVASFDFLVTDNGS
LANGGQTTSTAPATMVIDLTPVNDAPVLPEGTSVTGTTITEDQQLNAGELVADLVGAMTD
VDTGVHSATNGTQQGIAVYGAGSEGFGGGTWQYRLAGGTDWIDVTLDPGEVLLLGADDRI
RFSPDGENATEAQLSYYAWDGATGTAGNVVAGIAGPGNASNRGGTSAFSSNGASATVEVT
AVNDAPSISMGEGNTFYARGEAVALFSDETLQLTDPDEGAAVSQIVITLDGETTVDNAFG
TTYETIFSASGSTFVAQSGTELTISGTGVAGDPLTISGAGSMEDYREALLSLRYENTNPN
AFAGDRAISVTVTDETGAGSAPTDFILPVEWATVADLNGPSGEGRDHSITYLEGSGSQAI
ATADAEMIDQDGNTVEVVITLEDAVNGSAEMLFVDPAVLPALAALNIVVTGNGTHEIRLT
SEEGVDPTNFQLALRAVRYVNSSTAPTAAERHVTVSSTDADGNPGVPATTVIGMELVNDA
PVADLSISYEASETRNPLSGDQLLLDGTLDDADGLGPNPPVIEWLRDGVVIASGNGMPVY
TLKPADAGHVISARITYTDGEGNLEVINVDGPAMVGLNLEGTDGADLLIGSRGADVISGR
MFNDTLMGGAGNDSLYGNGDDDRLYVNEGNDSLYGEEGNDWLHGGQGDDLVVGGDGNDTL
AGGLGNDTLQGGAGNDTASYETATEGVTVSLALQGEGQFVNAQEGNDPLTSIENLTGSNH
DDTLIGDEGDNVLSGLAGNDVLVGGAGNDTLLGGAGNDIADYAAATGGVTVNLARDGQAQ
IIGADQGTDVLSSIEGVIGSAFNDILSGSAVANLIFGGDGADLATGGAGNDTILGGAGSD
SLYGNLGDDLLFGDVGNDWIHGGQGNDTVLGGFGDDTLAGGVGDDVVDGGDGIDTVEFQT
ATAGVTVDLSLQGQAQRISAEEGTDTLFSIENILGSRYDDRLLGDAGSNLIDGSAGNDTA
MGQAGEDLIFGGDGNDSLYGNQDNDTLVGGNGNDWLHGGQGNDLLVGDAGSDTLNGGVGD
DVLVGGQGFDLLTGGTGADTFVFGSLDSADADRITDFEQGVDQIVIADQLMWALENAELN
LADQIVWNAETGMLSIDLDAGEATRLVDLAQIDHDGTLNITIDDFQFLR
NT seq
7890 nt
NT seq
+upstream
nt +downstream
nt
atgccgacagtgaacctgacctctgccctgaccttctccgagggcggcgtgccgcagctc
gtcgacccgaacatcacgatcacgggcggcggagcctttaccgaaggctacatcgaattc
tcggtcagttcgcccacggccggcgacaacttcagcctgaccagcgccgccaatccgctg
gccaacggcgcgatctcgttcgagaacggcgacgtctatctcgggaccggctcggcccgc
gagcggatcggctcggtcgatgcgaccttcgacggccaggacggccagccgctgcgcatc
ctgttctcgagcccgctgccgaacgccggcttcgaggaaggcgaggcgaactggaccatc
cgcgacgagcaatatggcgacaacggcagcgagctgaacctcgacggcctgcagatcacg
ctggccaatgactcggcctacagcggcggcaccggcacgaccaacgtccaggcctccgcc
ggcatgacctgggacgggtcggtgcaggatggtgcgggcgttgacggatcgcgcgccctc
tatctcggcagcggcggaaacatcgttgcgggcgatcagaacccggccggcggctatcag
gtcaacggctacggctcgatccacggcccctatgccaccagctcggtgatcaccgtcgcg
cagggtgactcgatctcgctcgactttcaggccgtgggcacgagcgacgactacgaggtg
ttcggcttcctgcgtcgcgtcgacgccaacggcaacttcctgagcaacagcgtcagcagc
cccgacaacatcctgctcttcgcccagcggggcgatgacaccagcgggtggacgaccatc
agcaaggacggcctgcccgcaggcagctaccggttcgagttcgtcggcggcacctatgat
ggcacgggcggcctcgcggtgggctcgaacctctttgtcgacaacatccgcctgatctcg
gccacctcggtgaacgacagcatcgcccaggccatcgcccggcaggtcgcctaccagaac
gacgccaatgatgcgccggtcacccgccagatcacggtcacggccgtggacggcaacggc
atcagcggctcctcctcgaacggcctgaccttcgaaggcgagaacgacgcgccgagcctt
gccaacaccacgctcacctcgatcgccgaggacagcagccccgccggccagaccatcgcc
gcagccttcggcggctccttctcggatcccgacaacgcctattcccccaccgactcgatg
gcgggcgtcgtcatcaccggcaatgcggcgaccggcgcccaaggcgactggcagtattcg
accgacggcggcaccacctggatctcggtcggcagcgtgacctcgcagagcgggctcgtg
ctttcctcggccacgctgatccgcttcgaacccgcgctgaactggaacggcacgcccggc
gcgctgacgctccatgcgctggacagcacctatggcggcagcttcaccagcggcacgacg
gcggtgaacctcgacacgaccggcgccaccggcaccggcgcgctcagccagaacagcgcc
accggctcgatcaccgtcaccccggtcaacgacgcccccgtcttcaccgcggccccggtc
gcgctgacggttgccgacaccgaggccgtggacacgccggccgcgctcaccggctcgatc
tcggcctccgacctgcatggcggtgcgccgggcgaaggcggcacgctcagctacggcgtt
cagggcggcgtgtcggccaacggcttctcggttctgacgctgccctacggcacgctgtcg
gtgaaccagtcgaccggagcctacagcttcctgccgaaccccacggcgctgaacagcctc
gccgagggtgcagaggcgaacttctccttcacgctcaccgtctcggacgggcagggcggc
acgcagaccgcgccgctcgacatcaccttcaccggcgccaacgacgtgccggtcgtcagc
gcccagaccggcacggcggtcgaggcctcgggtctcaacaacaacgtcgccggcagcgcg
gccacgggctcgctgctgaccggtccgaatgcggcgaccgatatcgacggcgacgagatc
tcggtggtgggtgtgcgcaccggcggccagtccgagaccggcaccgaaggcgtctggacc
gacggcacgatcacgcttcagggcacctacggcacgctgacgctgaacgaggacggcagc
tggtcctacgcggccgacgatgacaacccgaccgtcgacggcctgaccgggccgaccgac
acgctggaggagaccttcacctacaccgtgacggacgcgaacggcgccaccgcgtcgcag
gagctgaccgtcaccatctcgggccgcaacgacgcgctgaacgtgtcgagcagcatcggc
accgatatctcgacgggcgaggatgccgacacgcagatcgaccttaccggcctcgtgttc
gaagaccccgatctgggctcggaaatctacgaattcgccgtggatgcgggccagggcacg
ctctggaccgaaggtgtggacgggctgaccgtcaccggcaacggaacgggccagctggtg
ctgaccggctcggccaccgcgatttccgaatggatcgcggccaacgacctgacctaccgc
tcgcccgtggaaggcagcggcgccgacacgatcagcctctcctacagcgaggcgggcgcc
gaggtccgcacggcgctcgagtccatcgacgtcgcggtggacatgatcaacgacccggcc
gtggtcgatgtgaacggctcggtcacgacccagggcagcgccggcgtggccgaagtggct
caggtcaccttcctgtcgaccggcaccgctcaggtgctgaatttcgacggggtgcagatg
cagatcgcggccggcagcactgccgccgagattgccgaagccttcgcggcgcaggagttc
ccgaactggaccgtcagccttgacggcgagggccgggtgacgctgaccgcgaccgccacc
ggcgcgcggccggacctgacggcggccgacttcaccaacggctcgggcgccttctcgccg
ctggtcgagaccaccggcggcaccgacggcagcatcaatttcaccgcgcgcggaccggcc
atcgccatcctgccgacgctggaactgagcgacgtcgacagcgcgatgatgtcgggcgcc
aaggtcagcatgaccgaaggcctgttcgacaacgggttcggcacgatctacgaacggctc
tcgctgtcggcggaggcgcgggaattcgcgcagcagaacggcgtgggcatcagcatcgtg
acgacggccgctgccggctcggtcatcaccttcaccggcatggcctcggcggaggtctac
gagaccatcctgcgcggcgtgatctacagcaacaccaacccgaatgcggtggcgggcacc
cgccccgtgaagatcgaagtgaccgactctgacgggctcgcctcgagcctctccagcgtc
aacctgacagagggcaacaccgacatcgccgtcggccagcgcatcttcatcaacggcgtg
gacagcggccaggtcgtctcgatggtgcgcgacgccaccagcttcgtggccagcggcccg
ctggccgatctggagccgggtgcggtgctgagcttccatgacggcagcggtcagcagacc
acggcggtttcggcgggcgacggcacggccacgatggacgtgaacgtgatctgggctccc
gtgatcgacatgaacggcgccggcgcgggcgatatccaccggacgacctacatcgagcag
catgccccgatcgccatcgcgaccgccgatgcccgcatcgtcgatcaggaaggtctgatc
cgctcgctcgacgtcgtgctgaccaacccgctcgacaatgtcgaaggttcggctccggtc
gaatatctcggcatctcgaaggcggtgctggacgtgctggcggcccgcggcatcaccatc
ggtgcccatgacggccagttcgacgccaacggcaacctgaccggcgccacctcgatcacc
ttcgcggcggccaacggcgccagcgccaccagcttccagattgcgctgcggggcgtgacc
tatgccaacatggacgatgccccggacaccgggacgcggatcgtgacggcgcagggcacc
gacatggacggcaacgagggcctgatctcgcacaccgagatcaacccgatcgcggtgggc
gacgcgccggtggcgatcgacagcggcgtgaccggctccgaagatgcgggccatgtcttt
gccgccggagacttcggctttgccgatccgctggatggcggcgcgaaccagctcgcctcg
atcaccatcaacagcctgcccgccacgggcacgctgctcctgggcggggtcgcggtcgcc
gtgggcaccgtggtcaccctcgcgcagcttcaggccggcgcgctgacctatcagccggtg
gccaacgtgaacggtgaaggggtcgcctcgttcgacttcctcgtgaccgacaacggcagc
ctcgccaacggcggccagaccacctcgaccgctccggcaaccatggtgatcgacctgacg
ccggtgaacgatgctccggtcctgccggaaggcacctccgtcaccggcaccacgatcacc
gaagaccagcagctgaatgccggtgaactggtggccgatctggtcggcgccatgacggat
gtcgatacgggcgtgcacagcgccacgaacggcacccagcagggcatcgcggtttatggc
gcgggctccgaagggttcggcggcggcacctggcagtatcgtctcgccggcggcaccgac
tggatcgacgtcaccctcgatccgggcgaggtcctgctgctcggtgcggacgaccgcatc
cgcttctcgccggatggcgagaacgcgaccgaggcgcagctgtcctactacgcctgggac
ggggcgaccggcaccgcgggcaacgtggtcgcaggcatcgcggggccgggcaatgcctcg
aaccgtggcggcacctcggccttctccagcaacggcgcctctgccacggtcgaggtgaca
gctgtcaacgacgcgccgtcgatcagcatgggcgagggcaataccttctatgctcgcggc
gaggcggtggcgctgttctcggacgagacgctgcaactgaccgacccggacgagggcgcg
gcggtaagccagattgtcatcacgctcgatggcgagaccacggtcgacaacgccttcggc
accacctacgagacgatcttctcggccagcggctcgaccttcgtggcccagtcgggcacc
gaactgaccatctcgggcaccggtgtggcgggcgatccgctcaccatctcgggggccggg
tcgatggaggactaccgtgaggcgctcctcagcctgcgctacgagaacaccaacccgaac
gccttcgcgggcgaccgggcgatctcggtcacggtgacggatgagacgggggcgggctcc
gcgccgacggacttcatcctgccggtggaatgggcaacggtggccgatctcaacggtccg
tcgggcgaaggccgcgaccactcgatcacctatctcgagggcagcggcagccaggccatc
gctacggccgatgccgagatgatcgaccaggacggcaacaccgtcgaggtcgtcatcacg
ctcgaggatgcggtgaacggctcggccgagatgctgttcgtcgatccggcggtcctgccg
gctctggcggcgctgaacatcgtggtcaccggcaacggcacccacgagatccggctgacg
agcgaggagggcgtggatcccacgaacttccagctggcgctgcgggccgtgcgttacgtc
aacagctcgaccgcacccaccgcggcggagcgccatgtcacggtctcctcgaccgatgcc
gacggcaacccgggcgttccggccaccacggtgatcgggatggagctggtgaacgacgca
ccggttgcggatctctcgatctcctacgaggcgtccgagacccgcaacccgctgtcgggc
gatcagctgctgctcgacggcacgctggacgatgccgacgggctcgggccgaacccgccg
gtcatcgaatggctgcgggacggtgtggtgatcgcttcgggcaacggcatgccggtctac
acgctgaaaccggcggatgcaggccatgtcatcagcgcccgcatcacctacaccgacggt
gaaggcaacctcgaggtcatcaacgtcgatggccccgccatggtcgggctgaacctcgaa
ggcaccgacggcgccgatctgctcatcggctcgcggggcgcggacgtgatctccggccgg
atgttcaacgacacgctgatgggcggggcgggcaacgacagcctctacggcaacggtgac
gacgaccgcctctacgttaacgagggcaacgacagcctctatggcgaggagggcaacgac
tggctgcatggcggtcagggcgacgacctggtcgtgggcggcgacggcaacgacacgctc
gcgggcggtctgggcaacgacaccctgcagggtggcgcgggcaacgacacggccagctac
gaaacggccaccgagggcgttaccgtcagcctcgcgctgcagggcgaaggccagttcgtg
aacgcgcaggaaggcaacgacccgctgacctcgatcgagaacctgacgggcagcaatcac
gacgacacgctgatcggggacgagggcgacaacgtgctctcgggtctcgcgggcaacgac
gtgctggtgggcggcgcgggcaatgacacgctgctcggcggtgccggcaacgacatcgcc
gactacgccgcggcgacgggcggggtgacggtcaatctggcgcgtgatgggcaggcgcag
atcatcggcgccgatcagggcaccgatgtcctgagctcgatcgagggtgtcatcggcagc
gccttcaacgacatcctgtcgggcagcgcggtcgccaacctcatcttcggtggggacggt
gccgacctggccaccggtggcgcgggcaacgacaccatcctcggcggcgccggatcggac
agcctctatggcaaccttggggatgacctcctctttggtgacgtgggcaacgactggatc
cacggcggccagggcaacgacaccgtcctcggcggtttcggcgacgatacgctggccggc
ggcgtcggtgacgatgtggtggatggcggcgatgggatcgacaccgtcgagttccagacc
gcaaccgccggtgtcaccgtggatctctcgctgcagggtcaggcgcagcgcatcagtgcc
gaggaaggcacggatacgctgttctcgatcgagaacatcctcggcagccggtatgacgac
cgcctgctgggcgatgcgggctccaacttgatcgacggcagtgccggcaacgacactgcc
atgggtcaggcgggcgaggacctcatcttcggcggggacggcaacgacagcctctatggc
aaccaggacaacgacactctggtcggcggcaacggcaacgactggttgcacggcggtcag
ggcaacgatctcctggtgggcgatgccggcagcgacaccctcaacggcggcgtgggcgac
gatgtgctggtcgggggtcagggcttcgaccttctgacgggcggcaccggggcggacact
ttcgtcttcggcagcctcgacagcgcggatgcggatcggatcaccgatttcgagcagggc
gtcgaccagatcgtgatcgccgaccagctgatgtgggcgctggagaatgccgagctgaac
ctcgccgatcagatcgtctggaatgccgagaccggcatgctctccatcgatctcgacgcc
ggggaggcgacccgtctggtggatcttgctcagatcgatcatgatggaacgctgaacatc
acgatcgacgacttccagttcctgcgctga
DBGET
integrated database retrieval system
