Cereibacter sphaeroides 2.4.1: RSP_3606
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Entry
RSP_3606 CDS
T00284
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN/SigL
KO
K03092
RNA polymerase sigma-54 factor
Organism
rsp
Cereibacter sphaeroides 2.4.1
Pathway
rsp02020
Two-component system
rsp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RSP_3606
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RSP_3606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsp03021
]
RSP_3606
Transcription machinery [BR:
rsp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RSP_3606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_23
HTH_IclR
HTH_3
HTH_Crp_2
MarR_2
HTH_Tnp_ISL3
HTH_31
HTH_17
LacI
Xre-like-HTH
Phage_CII
Motif
Other DBs
NCBI-ProteinID:
ABA81210
UniProt:
Q3IW74
LinkDB
All DBs
Position
2:701304..702602
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AA seq
432 aa
AA seq
DB search
MKSRQRISIAQTQRLQLNLGLTASIRVLNSDAEGLTRYLQEQAAENPHIQLEPATSTDWL
PRWTSVLSRLAQGEGSAGGETVAAAGPSLMAHVMARIDTLYPRGPERRIAILLAEALEPT
GWLGTGPDEIARQARVPSAEVEAVLAGLQKIEPAGLFARTLAECLRLQAIEAERLDSTLS
CLLDHLDLVAEGALGRLARLCNTDEAGVTARLRLLRTFDPKPGAQFDPGAAPVREPDLIA
TKGEAGWEVSLNRSAMPTVQIRKPDKRPTTPAARAAWTQAQAVGRMIENRNATLLRVARE
ILARQEAALDEGPSALVALTMTEVAEALGIHESTVSRVVAGTCVDTPRGTWWLRRMFSGR
LAEGGPSAAAIRAAIARLVAQEDPAAPLSDGALVEALAAEDMQLARRTVAKYREMLNIPP
GHRRRRRPSRSA
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcccgccagcgcatcagtatcgcccagacccagaggctgcagctcaatctcggc
ctcaccgcctcgatccgcgtcctgaattccgatgccgagggcctcacgcgctacctgcag
gagcaggcggcggagaacccccatatccagctcgaaccggcaacctcgaccgactggctg
ccgcgctggacgagcgttctgtcgcgcctcgcgcagggcgaggggtcggcgggcggagag
acggtggcggcggcggggccgagcctcatggcgcatgtgatggcgcgcatcgacacgctt
tatccgcgcgggcccgagcggcggatcgccatccttctggccgaagcgctggagcccacc
ggctggctcgggacgggaccggacgagatcgcccggcaggcccgcgtcccctccgccgag
gtcgaggccgtgctggccgggctgcagaagatcgagcccgccggcctcttcgcccgaacc
ctcgccgagtgcctgcggcttcaggccatcgaggccgagcggctcgattccaccctgagc
tgccttctcgaccatctcgacctggtggcagagggggccctcgggcggctcgcgcggctc
tgcaacacggacgaggccggggtgaccgcgcgcctgcggctcctgcggaccttcgacccg
aagcccggcgcgcagttcgatccgggcgcggcgccggtgcgcgagcccgacctgatcgcg
acgaagggcgaggccgggtgggaggtgtcgctgaaccgctcggccatgcccacggtgcag
atccgcaagccggacaagcgcccgacgacgccggccgcccgcgcggcctggacccaggcg
caggcggtgggccggatgatcgagaaccgcaatgccacgctgctgagggtcgcgcgcgag
atcctcgcccggcaggaggcggcgctcgacgaaggtccctcggcgctcgtggccctgacc
atgaccgaggtggccgaggcgctcggcatccacgagagcacggtgagccgcgtggtcgcg
ggcacctgcgtggacacgccgcgcggcacctggtggctgcggcgcatgttcagcggccgc
cttgccgagggcggtccctcggccgcggccatccgcgccgccatcgcccgcctcgtcgcg
caggaagatccggccgcgcctttgtccgacggcgctctggtcgaggcgctggcggccgag
gacatgcagctggcgcgccgcaccgtcgccaaatatcgcgagatgctgaacatccccccc
ggacaccgccgccgccgcaggccctcgcgctcggcctga
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